Skip Header

Contribute Send feedback
Read comments (?) or add your own

F2JMR3 (F2JMR3_CELLD) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length377 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL ADZ84714.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F2JMR3 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 8C442D88C5FBEA38

FASTA37741,969
        10         20         30         40         50         60 
MESHRPRVVA EVNLGAIEHN YKQIRQHIPN HTEIMAIVKA DGYGHGAKEV ANFLQEQGVN 

        70         80         90        100        110        120 
RFAVAIVAEG EELRSSGITS PILVLGYTPR ADIKTLIEND LTQTVFSYEM AKTISDEAGR 

       130        140        150        160        170        180 
LGKTVNIHLK VDTGMGRIGF LSSPKSIEEI LMITKLPHIN LEGIFTHFST ADEEDTSYTK 

       190        200        210        220        230        240 
EQWSIFEGFL KELSEVGLEL PIIHAANSAA IMCHEYTHLN LVRPGIILYG YYPSPYLGGK 

       250        260        270        280        290        300 
VLDLEPAMTL KTQVVHVKEL PEGQYVGYGR KFYTHQKTKI ATIPVGYADG YSRNLGNKGR 

       310        320        330        340        350        360 
VLIRGQYAPI IGNICMDQFM VDVTHIKGVS VEDEVVLFGK QQDAVIPVEE IAQSLGTINY 

       370 
EIVCMIGKRV PRIYIKP

« Hide

References

[1]"Complete genome sequence of the cellulose-degrading bacterium Cellulosilyticum lentocellum."
US DOE Joint Genome Institute
Miller D.A., Suen G., Bruce D., Copeland A., Cheng J.F., Detter C., Goodwin L.A., Han C.S., Hauser L.J., Land M.L., Lapidus A., Lucas S., Meincke L., Pitluck S., Tapia R., Teshima H., Woyke T., Fox B.G., Angert E.R., Currie C.R.
J. Bacteriol. 193:2357-2358(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002582 Genomic DNA. Translation: ADZ84714.1.
RefSeqYP_004309912.1. NC_015275.1.

3D structure databases

ProteinModelPortalF2JMR3.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ84714; ADZ84714; Clole_3017.
GeneID10332753.
KEGGcle:Clole_3017.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycCCLO642492:GIWK-3142-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2JMR3_CELLD
AccessionPrimary (citable) accession number: F2JMR3
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 3, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info