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F2JK99 (F2JK99_CELLD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Clole_3936 EMBL ADZ85614.1
OrganismCellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) (Clostridium lentocellum) [Complete proteome] [HAMAP] EMBL ADZ85614.1
Taxonomic identifier642492 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesLachnospiraceaeCellulosilyticum

Protein attributes

Sequence length181 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance By similarity. SAAS SAAS020057

Subunit structure

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18 By similarity. SAAS SAAS020057

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding SAAS SAAS020057
   Molecular functionRibonucleoprotein
Ribosomal protein SAAS SAAS020057
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_function5S rRNA binding

Inferred from electronic annotation. Source: InterPro

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F2JK99 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 459CFF0CD6C4356F

FASTA18120,108
        10         20         30         40         50         60 
MDIITVEKRS VLTKAKQLRR NGIIPSVIYG GSLPESLLVQ IDKNAAKKLL RCKREGSKME 

        70         80         90        100        110        120 
IELDSKLIPV QIKDIDSNIV NNEILHISFQ ALEADKRVNS KAQIILENTD KVVGVLEQLL 

       130        140        150        160        170        180 
FEVPYSALPS DMIDTVVVDL EGLAVGKVLT LEDIPVFKNE NIDLQVSADS MILKITDRKS 


S 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002582 Genomic DNA. Translation: ADZ85614.1.
RefSeqYP_004310812.1. NC_015275.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ85614; ADZ85614; Clole_3936.
GeneID10333691.
KEGGcle:Clole_3936.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02897.

Enzyme and pathway databases

BioCycCCLO642492:GIWK-4080-MONOMER.

Family and domain databases

Gene3D2.170.120.20. 1 hit.
2.40.240.10. 1 hit.
InterProIPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR020057. Ribosomal_L25_b-dom.
IPR001021. Ribosomal_L25_long.
IPR020055. Ribosomal_L25_short.
[Graphical view]
PfamPF01386. Ribosomal_L25p. 1 hit.
PF14693. Ribosomal_TL5_C. 1 hit.
[Graphical view]
ProDomPD012503. Ribosomal_L25. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50715. SSF50715. 1 hit.
TIGRFAMsTIGR00731. ctc_TL5. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF2JK99_CELLD
AccessionPrimary (citable) accession number: F2JK99
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)