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F2JK99

- F2JK99_CELLD

UniProt

F2JK99 - F2JK99_CELLD

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Protein
Submitted name: Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
Gene
Clole_3936
Organism
Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) (Clostridium lentocellum)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance By similarity.SAAS annotations

GO - Molecular functioni

  1. 5S rRNA binding Source: InterPro
  2. structural constituent of ribosome Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinSAAS annotations

Keywords - Ligandi

RNA-binding, rRNA-bindingSAAS annotations

Enzyme and pathway databases

BioCyciCCLO642492:GIWK-4080-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5Imported
Gene namesi
Ordered Locus Names:Clole_3936Imported
OrganismiCellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) (Clostridium lentocellum)Imported
Taxonomic identifieri642492 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceaeCellulosilyticum
ProteomesiUP000008467: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit; part of the 5S rRNA/L5/L18/L25 subcomplex. Contacts the 5S rRNA. Binds to the 5S rRNA independently of L5 and L18 By similarity.SAAS annotations

Family & Domainsi

Phylogenomic databases

KOiK02897.

Family and domain databases

Gene3Di2.170.120.20. 1 hit.
2.40.240.10. 1 hit.
InterProiIPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR020057. Ribosomal_L25_b-dom.
IPR001021. Ribosomal_L25_long.
[Graphical view]
PfamiPF14693. Ribosomal_TL5_C. 1 hit.
[Graphical view]
SUPFAMiSSF50715. SSF50715. 1 hit.
TIGRFAMsiTIGR00731. ctc_TL5. 1 hit.

Sequencei

Sequence statusi: Complete.

F2JK99-1 [UniParc]FASTAAdd to Basket

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MDIITVEKRS VLTKAKQLRR NGIIPSVIYG GSLPESLLVQ IDKNAAKKLL    50
RCKREGSKME IELDSKLIPV QIKDIDSNIV NNEILHISFQ ALEADKRVNS 100
KAQIILENTD KVVGVLEQLL FEVPYSALPS DMIDTVVVDL EGLAVGKVLT 150
LEDIPVFKNE NIDLQVSADS MILKITDRKS S 181
Length:181
Mass (Da):20,108
Last modified:May 31, 2011 - v1
Checksum:i459CFF0CD6C4356F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002582 Genomic DNA. Translation: ADZ85614.1.
RefSeqiWP_013658887.1. NC_015275.1.
YP_004310812.1. NC_015275.1.

Genome annotation databases

EnsemblBacteriaiADZ85614; ADZ85614; Clole_3936.
GeneIDi10333691.
KEGGicle:Clole_3936.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002582 Genomic DNA. Translation: ADZ85614.1 .
RefSeqi WP_013658887.1. NC_015275.1.
YP_004310812.1. NC_015275.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADZ85614 ; ADZ85614 ; Clole_3936 .
GeneIDi 10333691.
KEGGi cle:Clole_3936.

Phylogenomic databases

KOi K02897.

Enzyme and pathway databases

BioCyci CCLO642492:GIWK-4080-MONOMER.

Family and domain databases

Gene3Di 2.170.120.20. 1 hit.
2.40.240.10. 1 hit.
InterProi IPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR020057. Ribosomal_L25_b-dom.
IPR001021. Ribosomal_L25_long.
[Graphical view ]
Pfami PF14693. Ribosomal_TL5_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50715. SSF50715. 1 hit.
TIGRFAMsi TIGR00731. ctc_TL5. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5.

Entry informationi

Entry nameiF2JK99_CELLD
AccessioniPrimary (citable) accession number: F2JK99
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: September 3, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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