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F2JFM7

- F2JFM7_HELP9

UniProt

F2JFM7 - F2JFM7_HELP9

Protein

Superoxide dismutase

Gene

sodF

Organism
Helicobacter pylori 2018
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciHPYL985080:GLE1-1097-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodFImported
    ORF Names:hp2018_1021Imported
    OrganismiHelicobacter pylori 2018Imported
    Taxonomic identifieri985080 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
    ProteomesiUP000008127: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    KOiK04564.
    OMAiVENLINW.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F2JFM7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFTLRELPFA KDSMGDFLSP VAFDFHHGKH HQAYVNNLNN LIKGTDFEKS    50
    SLFAILTKSS GGVFNNAAQI YNHDFYWDCL SPKATALSDE LKGALEKDFG 100
    SLEKFKEDFI KSATTLFGSG WNWAAYNLDT QKIEIIQTSN AQTPVTDKKV 150
    PLLVVDVWEH AYYIDHKNAR PVYLEKFYGH VNWHFVSQCY EWAKKEGLGS 200
    VDYYINELVH KKV 213
    Length:213
    Mass (Da):24,458
    Last modified:May 31, 2011 - v1
    Checksum:i8E40C1B9FD75B97F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002572 Genomic DNA. Translation: ADZ51735.1.
    RefSeqiYP_005791872.1. NC_017381.1.

    Genome annotation databases

    EnsemblBacteriaiADZ51735; ADZ51735; hp2018_1021.
    GeneIDi12372269.
    KEGGihpw:hp2018_1021.
    PATRICi47126818. VBIHelPyl183925_1063.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002572 Genomic DNA. Translation: ADZ51735.1 .
    RefSeqi YP_005791872.1. NC_017381.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADZ51735 ; ADZ51735 ; hp2018_1021 .
    GeneIDi 12372269.
    KEGGi hpw:hp2018_1021.
    PATRICi 47126818. VBIHelPyl183925_1063.

    Phylogenomic databases

    KOi K04564.
    OMAi VENLINW.

    Enzyme and pathway databases

    BioCyci HPYL985080:GLE1-1097-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomes of two chronological isolates (Helicobacter pylori 2017 and 2018) of the West African Helicobacter pylori strain 908 obtained from a single patient."
      Avasthi T.S., Devi S.H., Taylor T.D., Kumar N., Baddam R., Kondo S., Suzuki Y., Lamouliatte H., Megraud F., Ahmed N.
      J. Bacteriol. 193:3385-3386(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2018Imported.

    Entry informationi

    Entry nameiF2JFM7_HELP9
    AccessioniPrimary (citable) accession number: F2JFM7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3