F2J9C6 (F2J9C6_HELP9) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ABC transporter permease EMBL ADZ49339.1

Gene names

ORF Names:

hp2017_0258 EMBL ADZ49339.1

Organism

Helicobacter pylori 2017 EMBL ADZ49339.1

Taxonomic identifier

985081 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori › Helicobacter pylori (strain 908)

Protein attributes

Sequence length	340 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU000478.
Sequence similarities	Belongs to the binding-protein-dependent transport system permease family. RuleBase RU000478 Contains 1 ABC transmembrane type-1 domain. SAAS SAAS000515

Ontologies

Keywords
Biological process	Transport RuleBase RU000478 SAAS SAAS000515
Cellular component	Cell membrane SAAS SAAS000515 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS000515
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2J9C6 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: 277537B0AEB97BB4	FASTA	340	37,966
	10 20 30 40 50 60 MSVSSLFKMR ILSFKKNKRA VFSLYLFIAL LALSLLAPLW VNDRPLFIYK DHKAYFPMFK 70 80 90 100 110 120 NYAEVEFGGD FFTPTDYNDP YVQNTLLKDA FIIHALIPYS YNTIIMDLDS PAPNPPSFKH 130 140 150 160 170 180 LLGTDDQARD VLARLVYGYR VSLVFGILLT LFSVLIGVSL GAFQGYYGGL VDLVGQRLSE 190 200 210 220 230 240 IWSAIPMLFL LIVISSTFNS NFWIILFLVL LFSWMGLSQV VRTEFLKARN MDYTKAARAL 250 260 270 280 290 300 GVNDLKIIFY HVLPNALVAT ITYIPFLMAA SISTLVSLDF LGFGMPIGSA SLGELVNQGK 310 320 330 340 DNLTTPHLAV VAFVAISLLL SVLVFIGEGV RDAFNANMLK

References

[1]

"Genomes of Two Chronological Isolates (Helicobacter pylori 2017 and 2018) of the West African Helicobacter pylori Strain 908 Obtained from a Single Patient." Avasthi T.S., Devi S.H., Taylor T.D., Kumar N., Baddam R., Kondo S., Suzuki Y., Lamouliatte H., Megraud F., Ahmed N. J. Bacteriol. 193:3385-3386(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 2017 EMBL ADZ49339.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002571 Genomic DNA. Translation: ADZ49339.1.
RefSeq	YP_005783235.1. NC_017374.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADZ49339; ADZ49339; hp2017_0258.
GeneID	12363400.
KEGG	hpq:hp2017_0258.
PATRIC	47121785. VBIHelPyl182737_0269.
Phylogenomic databases
KO	K13895.
OMA	YPEEKFG.
Family and domain databases
InterPro	IPR000515. BPD_transp. IPR025966. OppC_N. [Graphical view]
Pfam	PF00528. BPD_transp_1. 1 hit. PF12911. OppC_N. 1 hit. [Graphical view]
PROSITE	PS50928. ABC_TM1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F2J9C6_HELP9

Accession

Primary (citable) accession number: F2J9C6

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)