SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

F2J5R7

- F2J5R7_POLGS

UniProt

F2J5R7 - F2J5R7_POLGS

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Elongation factor Tu

Gene
tuf, SL003B_1723, SL003B_1737
Organism
Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTP By similarityUniRule annotation
Nucleotide bindingi81 – 855GTP By similarityUniRule annotation
Nucleotide bindingi136 – 1394GTP By similarityUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciPGIL991905:GJ0L-1748-MONOMER.
PGIL991905:GJ0L-1763-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotationImported
Ordered Locus Names:SL003B_1723Imported, SL003B_1737Imported
OrganismiPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)Imported
Taxonomic identifieri991905 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaPolymorphum
ProteomesiUP000008130: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK02358.
OMAiERKPHIN.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2J5R7-1 [UniParc]FASTAAdd to Basket

« Hide

MAKEKFERTK PHVNIGTIGH VDHGKTTLTA AITMTLAETG GAVAKAYDQI    50
DAAPEEKARG ITISTAHVEY ETENRHYAHV DCPGHADYVK NMITGAAQMD 100
GAILVCSAAD GPMPQTREHI LLARQVGVPA LVVFMNKVDQ VDDEELLELV 150
EMELRELLSS YDFPGDDIPI VKGSALAAVE NRDPAIGRDA IRALMAAVDE 200
YIPTPERPID QPFLMPIEDV FSISGRGTVV TGRVERGIVK VGEEVEIVGI 250
RDTRKTTVTG VEMFRKLLDQ GQAGDNIGAL IRGIGREDVE RGQVLCKPGS 300
VTPHTKFKAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGIVSLPEGT 350
EMVMPGDNVS VEVELIVPIA MEEGLRFAIR EGGRTVGAGV VASIIK 396
Length:396
Mass (Da):43,047
Last modified:May 31, 2011 - v1
Checksum:i3CA41541106EE42A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002568 Genomic DNA. Translation: ADZ70150.1.
CP002568 Genomic DNA. Translation: ADZ70163.1.
RefSeqiWP_013652468.1. NC_015259.1.
YP_004303451.1. NC_015259.1.
YP_004303465.1. NC_015259.1.

Genome annotation databases

EnsemblBacteriaiADZ70150; ADZ70150; SL003B_1723.
ADZ70163; ADZ70163; SL003B_1737.
GeneIDi10419073.
10421702.
KEGGipgv:SL003B_1723.
pgv:SL003B_1737.
PATRICi47181356. VBIPolGil182274_1766.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002568 Genomic DNA. Translation: ADZ70150.1 .
CP002568 Genomic DNA. Translation: ADZ70163.1 .
RefSeqi WP_013652468.1. NC_015259.1.
YP_004303451.1. NC_015259.1.
YP_004303465.1. NC_015259.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADZ70150 ; ADZ70150 ; SL003B_1723 .
ADZ70163 ; ADZ70163 ; SL003B_1737 .
GeneIDi 10419073.
10421702.
KEGGi pgv:SL003B_1723.
pgv:SL003B_1737.
PATRICi 47181356. VBIPolGil182274_1766.

Phylogenomic databases

KOi K02358.
OMAi ERKPHIN.

Enzyme and pathway databases

BioCyci PGIL991905:GJ0L-1748-MONOMER.
PGIL991905:GJ0L-1763-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Polymorphum gilvum SL003B-26A1T, a crude oil-degrading bacterium from oil-polluted saline soil."
    Li S.G., Tang Y.Q., Nie Y., Cai M., Wu X.L.
    J. Bacteriol. 193:2894-2895(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMG 25793 / CGMCC 1.9160 / SL003B-26A1 and SL003B-26A1Imported.

Entry informationi

Entry nameiF2J5R7_POLGS
AccessioniPrimary (citable) accession number: F2J5R7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: September 3, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi