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Protein
Submitted name:

Probable 6-phosphogluconate dehydrogenase protein

Gene

SL003B_3735

Organism
Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei162 – 1621UniRule annotation

GO - Molecular functioni

  1. 3-hydroxyisobutyrate dehydrogenase activity Source: InterPro
  2. NAD binding Source: InterPro
  3. phosphogluconate dehydrogenase (decarboxylating) activity Source: InterPro

GO - Biological processi

  1. pentose-phosphate shunt Source: InterPro
  2. valine metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPGIL991905:GJ0L-3781-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable 6-phosphogluconate dehydrogenase proteinImported
Gene namesi
Ordered Locus Names:SL003B_3735Imported
OrganismiPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)Imported
Taxonomic identifieri991905 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaPolymorphum
ProteomesiUP000008130: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK00020.

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR002204. 3-OH-isobutyrate_DH-rel_CS.
IPR008927. 6-PGluconate_DH_C-like.
IPR006115. 6PGDH_NADP-bd.
IPR013328. DH_multihelical.
IPR015815. HIBADH-type.
IPR016040. NAD(P)-bd_dom.
IPR029154. NADP-bd.
[Graphical view]
PfamiPF14833. NAD_binding_11. 1 hit.
PF03446. NAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000103. HIBADH. 1 hit.
SUPFAMiSSF48179. SSF48179. 1 hit.
PROSITEiPS00895. 3_HYDROXYISOBUT_DH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2J3M0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIGFIGLGV MGGAMAGHLA RAGHDLTGFD LSPDAGAGLA RAASAADAVR
60 70 80 90 100
GAEVVFTMLP HGRAVAGVID EILDALPEGC LFVDTSSSEP WLTKQTADRL
110 120 130 140 150
AARGVTMVDA PVSGASWGAR DAQLVFMVGG DDAAVARVRP LLALMGKAAH
160 170 180 190 200
HVGPLGAGHA MKTINNVITA MTVISTTEAM LIGKAYGLIP SAMADVLNVS
210 220 230 240 250
TGQSFWTTER LKQDVLNRAF KDEFKLTLMR KDVDIANALG REMGLELPLL
260 270 280
SLGEALWRQA DADLGTGAAV TDMVRWIEGK VGGELTDD
Length:288
Mass (Da):30,021
Last modified:May 31, 2011 - v1
Checksum:i8A4B06B03E789522
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002568 Genomic DNA. Translation: ADZ72156.1.
RefSeqiYP_004305460.1. NC_015259.1.

Genome annotation databases

EnsemblBacteriaiADZ72156; ADZ72156; SL003B_3735.
GeneIDi10421066.
KEGGipgv:SL003B_3735.
PATRICi47185582. VBIPolGil182274_3852.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002568 Genomic DNA. Translation: ADZ72156.1.
RefSeqiYP_004305460.1. NC_015259.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADZ72156; ADZ72156; SL003B_3735.
GeneIDi10421066.
KEGGipgv:SL003B_3735.
PATRICi47185582. VBIPolGil182274_3852.

Phylogenomic databases

KOiK00020.

Enzyme and pathway databases

BioCyciPGIL991905:GJ0L-3781-MONOMER.

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR002204. 3-OH-isobutyrate_DH-rel_CS.
IPR008927. 6-PGluconate_DH_C-like.
IPR006115. 6PGDH_NADP-bd.
IPR013328. DH_multihelical.
IPR015815. HIBADH-type.
IPR016040. NAD(P)-bd_dom.
IPR029154. NADP-bd.
[Graphical view]
PfamiPF14833. NAD_binding_11. 1 hit.
PF03446. NAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000103. HIBADH. 1 hit.
SUPFAMiSSF48179. SSF48179. 1 hit.
PROSITEiPS00895. 3_HYDROXYISOBUT_DH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Polymorphum gilvum SL003B-26A1T, a crude oil-degrading bacterium from oil-polluted saline soil."
    Li S.G., Tang Y.Q., Nie Y., Cai M., Wu X.L.
    J. Bacteriol. 193:2894-2895(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMG 25793 / CGMCC 1.9160 / SL003B-26A1Imported.

Entry informationi

Entry nameiF2J3M0_POLGS
AccessioniPrimary (citable) accession number: F2J3M0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: March 4, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.