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F2IYS4 (F2IYS4_POLGS) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SL003B_1092 EMBL ADZ69521.1
OrganismPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) [Complete proteome] [HAMAP] EMBL ADZ69521.1
Taxonomic identifier991905 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaPolymorphum

Protein attributes

Sequence length665 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
F2IYS4 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 0F4884D7F7130A12

FASTA66572,093
        10         20         30         40         50         60 
MTGTKPHLSR AHALDLLRAM IRIRRFEAKC AELYTQEKIR GFLHLYDGEE AIAVGVIPLL 

        70         80         90        100        110        120 
TERDRIVATY REHGHALARG LPMGAVLAEM YGVAEGCAGG RGGSMHLFSR EANFYGGNAI 

       130        140        150        160        170        180 
VGGGLPLAAG LALADRMRGE DRVTACFFGE GAVAEGEFHE SLNLASLWQL PVLFVCENNG 

       190        200        210        220        230        240 
YAMGTALDLS EAVTDIRAKA AAYAVDGEVA DGMDVVAVEA ATRRALEAIR DTGRPRFLEC 

       250        260        270        280        290        300 
RTYRFRAHSM FDAQLYRDKA EVEEWRRKGP IVRFQGWLEQ SGLVHVDEIA AIETEVEAEI 

       310        320        330        340        350        360 
AEAVAFSEAG TLEPVEDLTK YVMAPERPLA PTAPAPSAET VETTYREAVR AAIVDAMTRD 

       370        380        390        400        410        420 
ERVFLMGEDV GRYGGCYAVS KGLLSEFGPE RIRDTPLSES GFTGAGIGAA MAGMRPIVEV 

       430        440        450        460        470        480 
MTVNFSLLAL DQILNTAATY RHMSNNQFGV PVVIRMATGA GRQLAAQHSH SLEGWYAHIP 

       490        500        510        520        530        540 
GLRVLAPATL EDARGMLWTA LQDPDPVLIF ENVMLYNRTG RLAADAGPVD IDRAAVRREG 

       550        560        570        580        590        600 
RDLSLVTYGG SLHKCLEAAE VLAGEGIEAE VVDLRTLRPL DMDTVLASVA RTHRLLVVDE 

       610        620        630        640        650        660 
GWRTGSLAAE IGMQVTERAF YDLDAPPARV CSAEVPIPYA RHLEEASIPQ VPAIVAAAKS 


LFGSR 

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References

[1]"Complete genome sequence of Polymorphum gilvum SL003B-26A1T, a crude oil-degrading bacterium from oil-polluted saline soil."
Li S.G., Tang Y.Q., Nie Y., Cai M., Wu X.L.
J. Bacteriol. 193:2894-2895(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LMG 25793 / CGMCC 1.9160 / SL003B-26A1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002568 Genomic DNA. Translation: ADZ69521.1.
RefSeqYP_004302821.1. NC_015259.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADZ69521; ADZ69521; SL003B_1092.
GeneID10418431.
KEGGpgv:SL003B_1092.
PATRIC47180036. VBIPolGil182274_1113.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK11381.
OMAIVGMISH.

Enzyme and pathway databases

BioCycPGIL991905:GJ0L-1110-MONOMER.

Family and domain databases

Gene3D3.40.50.920. 1 hit.
InterProIPR001017. DH_E1.
IPR027110. PDHB.
IPR017597. Pyrv_DH_E1_asu_subgrp-y.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view]
PANTHERPTHR11624:SF11. PTHR11624:SF11. 1 hit.
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52922. SSF52922. 1 hit.
TIGRFAMsTIGR03182. PDH_E1_alph_y. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF2IYS4_POLGS
AccessionPrimary (citable) accession number: F2IYS4
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)