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F2IVD0

- F2IVD0_POLGS

UniProt

F2IVD0 - F2IVD0_POLGS

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Protein
Submitted name:

Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component

Gene

sucA

Organism
Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPGIL991905:GJ0L-4280-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 componentImported
Gene namesi
Name:sucAImported
Ordered Locus Names:SL003B_4231Imported
OrganismiPolymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)Imported
Taxonomic identifieri991905 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaPolymorphum
ProteomesiUP000008130: Chromosome

Structurei

3D structure databases

ProteinModelPortaliF2IVD0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK00164.
OMAiGHQNANL.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

F2IVD0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARQDANNVF ALTSFLYGAN AAYIEELYAQ YQENPASLDP EWQDFFGALQ
60 70 80 90 100
DEKADVLREA RGAPWKRADW PLPAHGDLVN AFDGNWAPVE KALGDKLKKQ
110 120 130 140 150
AEAKGARLSD ADVHQATRDS VRALMMIRAY RMRGHLHADL DPLRLSPPGD
160 170 180 190 200
HEELHPSSYG FSDEDWDRPI FIDHVLGLEY ATIREMLEIL KRTYCSTLGV
210 220 230 240 250
EFMHISDPAA KAWIQERIEG PDKHVEFTPR GKRAILNKLV EAEGFEKFLD
260 270 280 290 300
VKYTGTKRFG LDGGEALIPA LEQIIKRGGQ MGLKEIVLGM AHRGRLNVLS
310 320 330 340 350
QVMAKPHRAI FHEFKGGSYA PDDVEGSGDV KYHLGASSDR SFDGNDVHLS
360 370 380 390 400
LTANPSHLEI VNPVVLGKAR AKQDQHSAVD GHWVTDTTTI DRSKVLPLLL
410 420 430 440 450
HGDAAFAGQG VVAECFGLSA LRGHRTGGSI HVIINNQIGF TTNPRFSRSS
460 470 480 490 500
PYPSDVAKVI EAPIFHVNGD DPEAVVYAAK IATEFRQIFG RPVVIDMICY
510 520 530 540 550
RRFGHNEGDE PAFTQPIMYR KIRKHPTTLQ IYADRLIAEG VITAEEVEEL
560 570 580 590 600
KAAWRKHLDE EFEAGQTYKP NKADWLDGKW AGLKRAADEE DPRRGSTGVP
610 620 630 640 650
VSELKEIGRR LSTVPDGFNV HRTIGRFMSN RAAMIETGEG IDWATAEALA
660 670 680 690 700
FGSLLREGHP VRLSGQDCER GTFSQRHSVL YDQEDEGRYI PLNHLSDDQA
710 720 730 740 750
RYEVINSMLS EEAVLGFEYG YSLAEPKALT LWEAQFGDFA NGAQVLFDQF
760 770 780 790 800
ISSGERKWLR MSGLVCLLPH GYEGQGPEHS SARLERYLQL CAEDNMQVAN
810 820 830 840 850
CTTPANYFHI LRRQLKRDIR KPLILMTPKS LLRHKRAVST LAELGETSSF
860 870 880 890 900
HRLLWDDAQY LADSPVKLVA DDKIRRVVMC SGKVYFDLYE EREKRGIDDV
910 920 930 940 950
YLLRVEQLYP FPKKALAQEL ARFRNADMVW CQEEPKNMGG WTFVEPYIEW
960 970 980 990
VLTEVGHKVR RPRYAGRAAM ASTATGLMSQ HLAQLQAFLD EAFAD
Length:995
Mass (Da):111,956
Last modified:May 31, 2011 - v1
Checksum:i3FD8A486DFC80EDE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002568 Genomic DNA. Translation: ADZ72648.1.
RefSeqiYP_004305954.1. NC_015259.1.

Genome annotation databases

EnsemblBacteriaiADZ72648; ADZ72648; SL003B_4231.
GeneIDi10421559.
KEGGipgv:SL003B_4231.
PATRICi47186612. VBIPolGil182274_4363.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002568 Genomic DNA. Translation: ADZ72648.1 .
RefSeqi YP_004305954.1. NC_015259.1.

3D structure databases

ProteinModelPortali F2IVD0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADZ72648 ; ADZ72648 ; SL003B_4231 .
GeneIDi 10421559.
KEGGi pgv:SL003B_4231.
PATRICi 47186612. VBIPolGil182274_4363.

Phylogenomic databases

KOi K00164.
OMAi GHQNANL.

Enzyme and pathway databases

BioCyci PGIL991905:GJ0L-4280-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Polymorphum gilvum SL003B-26A1T, a crude oil-degrading bacterium from oil-polluted saline soil."
    Li S.G., Tang Y.Q., Nie Y., Cai M., Wu X.L.
    J. Bacteriol. 193:2894-2895(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMG 25793 / CGMCC 1.9160 / SL003B-26A1Imported.

Entry informationi

Entry nameiF2IVD0_POLGS
AccessioniPrimary (citable) accession number: F2IVD0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: October 1, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3