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F2ISX4

- F2ISX4_VIBCL

UniProt

F2ISX4 - F2ISX4_VIBCL

Protein
Submitted name:

Periplasmic alpha-amylase

Gene

VCLMA_B0633

Organism
Vibrio cholerae LMA3984-4
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciVCHO935297:GLMO-3215-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Periplasmic alpha-amylaseImported
    Gene namesi
    ORF Names:VCLMA_B0633Imported
    OrganismiVibrio cholerae LMA3984-4Imported
    Taxonomic identifieri935297 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000006792: Chromosome II

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F2ISX4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLNALTLSL LSALALPALA SSASTANLTV ATTTNSRDFP LQADEPLVIP    50
    LTKGDYTLTI SGIGGDCPPA PEQEIKFNTP IALNCHVPTQ LPLSVRFTGD 100
    YAFQWQAQNN TLTFVRQTTK AAKTEFRRPI PNVSCEVYQG GEVTLDLASS 150
    FADGTELQDA MTGQVVTVEQ GKVRLTPSAN SGGLVLLEPK QTAKAEPKQP 200
    FTYRNANIYF VMVDRFYNAD PSNDGSYGRH KDGQEEIGTF HGGDLKGVIA 250
    KLDHIQSLGT DAIWLSPIVE QVHGFVGGGE KGSFPFYAYH GYWTRDFTKI 300
    DANFGKDEDL QTLVREAHRR GIKILMDAVI NHAGYATLAD LQQDAVQVVN 350
    APMLPERWND WKPSADENWH SFHQAIDYQS KNWQQWWGPD WVRAGLPGYP 400
    APGSSDITMN LAGLPDFRTE STQAVTPPQW LLNNPGTRVV SKPNYTVADY 450
    LIEWQSDWVR RFGIDGFRID TVKHVEGEVW QRLKQRATES LAAWRKDNNQ 500
    SGEPFWMMGE VWGHAAYRSP YFDDGFDALI NFDIQKRMDN GAACLSQMAM 550
    VYRDYAQTLA KYPDFNPVSY MSSHDTELFF GRFKSLDMQR NAANALLLTP 600
    GAIQVYYGDE VAREAGPYAD DFHQGTRSDM PWEWNAERQA LLKHWQTLGQ 650
    FRQRHPAIGA GDHREIAQSN AYVFTRTLGE DKVVVAFVGR 690
    Length:690
    Mass (Da):77,259
    Last modified:May 31, 2011 - v1
    Checksum:iA1B1E0C1C8B7A844
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002556 Genomic DNA. Translation: AEA80261.1.
    RefSeqiYP_005632506.1. NC_017269.1.

    Genome annotation databases

    EnsemblBacteriaiAEA80261; AEA80261; VCLMA_B0633.
    GeneIDi12269702.
    KEGGivcl:VCLMA_B0633.
    PATRICi54236781. VBIVibCho179000_3315.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002556 Genomic DNA. Translation: AEA80261.1 .
    RefSeqi YP_005632506.1. NC_017269.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA80261 ; AEA80261 ; VCLMA_B0633 .
    GeneIDi 12269702.
    KEGGi vcl:VCLMA_B0633.
    PATRICi 54236781. VBIVibCho179000_3315.

    Phylogenomic databases

    KOi K01176.

    Enzyme and pathway databases

    BioCyci VCHO935297:GLMO-3215-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: LMA3984-4Imported.

    Entry informationi

    Entry nameiF2ISX4_VIBCL
    AccessioniPrimary (citable) accession number: F2ISX4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3