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F2ISX4

- F2ISX4_VIBCL

UniProt

F2ISX4 - F2ISX4_VIBCL

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Protein
Submitted name:

Periplasmic alpha-amylase

Gene

VCLMA_B0633

Organism
Vibrio cholerae LMA3984-4
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciVCHO935297:GLMO-3215-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported
Gene namesi
ORF Names:VCLMA_B0633Imported
OrganismiVibrio cholerae LMA3984-4Imported
Taxonomic identifieri935297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000006792: Chromosome II

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F2ISX4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKLNALTLSL LSALALPALA SSASTANLTV ATTTNSRDFP LQADEPLVIP
60 70 80 90 100
LTKGDYTLTI SGIGGDCPPA PEQEIKFNTP IALNCHVPTQ LPLSVRFTGD
110 120 130 140 150
YAFQWQAQNN TLTFVRQTTK AAKTEFRRPI PNVSCEVYQG GEVTLDLASS
160 170 180 190 200
FADGTELQDA MTGQVVTVEQ GKVRLTPSAN SGGLVLLEPK QTAKAEPKQP
210 220 230 240 250
FTYRNANIYF VMVDRFYNAD PSNDGSYGRH KDGQEEIGTF HGGDLKGVIA
260 270 280 290 300
KLDHIQSLGT DAIWLSPIVE QVHGFVGGGE KGSFPFYAYH GYWTRDFTKI
310 320 330 340 350
DANFGKDEDL QTLVREAHRR GIKILMDAVI NHAGYATLAD LQQDAVQVVN
360 370 380 390 400
APMLPERWND WKPSADENWH SFHQAIDYQS KNWQQWWGPD WVRAGLPGYP
410 420 430 440 450
APGSSDITMN LAGLPDFRTE STQAVTPPQW LLNNPGTRVV SKPNYTVADY
460 470 480 490 500
LIEWQSDWVR RFGIDGFRID TVKHVEGEVW QRLKQRATES LAAWRKDNNQ
510 520 530 540 550
SGEPFWMMGE VWGHAAYRSP YFDDGFDALI NFDIQKRMDN GAACLSQMAM
560 570 580 590 600
VYRDYAQTLA KYPDFNPVSY MSSHDTELFF GRFKSLDMQR NAANALLLTP
610 620 630 640 650
GAIQVYYGDE VAREAGPYAD DFHQGTRSDM PWEWNAERQA LLKHWQTLGQ
660 670 680 690
FRQRHPAIGA GDHREIAQSN AYVFTRTLGE DKVVVAFVGR
Length:690
Mass (Da):77,259
Last modified:May 31, 2011 - v1
Checksum:iA1B1E0C1C8B7A844
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002556 Genomic DNA. Translation: AEA80261.1.
RefSeqiWP_000772630.1. NC_017269.1.
YP_005632506.1. NC_017269.1.

Genome annotation databases

EnsemblBacteriaiAEA80261; AEA80261; VCLMA_B0633.
GeneIDi12269702.
KEGGivcl:VCLMA_B0633.
PATRICi54236781. VBIVibCho179000_3315.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002556 Genomic DNA. Translation: AEA80261.1 .
RefSeqi WP_000772630.1. NC_017269.1.
YP_005632506.1. NC_017269.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEA80261 ; AEA80261 ; VCLMA_B0633 .
GeneIDi 12269702.
KEGGi vcl:VCLMA_B0633.
PATRICi 54236781. VBIVibCho179000_3315.

Phylogenomic databases

KOi K01176.

Enzyme and pathway databases

BioCyci VCHO935297:GLMO-3215-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMA3984-4Imported.

Entry informationi

Entry nameiF2ISX4_VIBCL
AccessioniPrimary (citable) accession number: F2ISX4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: October 29, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3