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F2ISG4

- F2ISG4_VIBCL

UniProt

F2ISG4 - F2ISG4_VIBCL

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Protein

Alpha-amylase

Gene

VCLMA_B0222

Organism
Vibrio cholerae LMA3984-4
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciVCHO935297:GLMO-2801-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:VCLMA_B0222Imported
OrganismiVibrio cholerae LMA3984-4Imported
Taxonomic identifieri935297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000006792: Chromosome II

Structurei

3D structure databases

ProteinModelPortaliF2ISG4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

F2ISG4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKSSYLVLCA TFAAASFTSS VQAEAILHAF NWKYADVTAN AAQIAAAGYK
60 70 80 90 100
KVLISPALKS SGNEWWARYQ PQDLRVIDSP LGNKTDLQTL IKTLQDYGVE
110 120 130 140 150
VYADVVFNHM ANESWKRSDL NYPGSEVLAS YTNQAYYYQQ QKLFGDLSHN
160 170 180 190 200
LFSQNDFHPE GCITDWGNPG HVQYWRLCGG AGDRGLPDLD ANAWVINQQR
210 220 230 240 250
AYLQALKQMG IRGFRIDAVK HMSQYHIDQV FTPEIISGMH VFGEVITSGG
260 270 280 290 300
QGDGSYDAFL APYLNNTTHA AYDFPLFASI RAAFSYQGSM SQLHDPQAYG
310 320 330 340 350
QALPNARAIT FAITHDIPTN DGFRYQILNP QDEQLAYAYL LGKDGGTPLI
360 370 380 390 400
YSDDLADHED KDNGRWANVW NQPSMQHMLR FHNAMQGKPM TVMYSDSCLL
410 420 430 440 450
LFKRGKEGVV GINKCGESKN VTIDTYQHEF NWYQTYQDTL SDDRFSVSSR
460
YHTLTIPARV ARMWML
Length:466
Mass (Da):52,553
Last modified:May 31, 2011 - v1
Checksum:i84464872F6D634F7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002556 Genomic DNA. Translation: AEA79866.1.
RefSeqiYP_005632111.1. NC_017269.1.

Genome annotation databases

EnsemblBacteriaiAEA79866; AEA79866; VCLMA_B0222.
GeneIDi12269288.
KEGGivcl:VCLMA_B0222.
PATRICi54235912. VBIVibCho179000_2893.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002556 Genomic DNA. Translation: AEA79866.1 .
RefSeqi YP_005632111.1. NC_017269.1.

3D structure databases

ProteinModelPortali F2ISG4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEA79866 ; AEA79866 ; VCLMA_B0222 .
GeneIDi 12269288.
KEGGi vcl:VCLMA_B0222.
PATRICi 54235912. VBIVibCho179000_2893.

Phylogenomic databases

KOi K01176.

Enzyme and pathway databases

BioCyci VCHO935297:GLMO-2801-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMA3984-4Imported.

Entry informationi

Entry nameiF2ISG4_VIBCL
AccessioniPrimary (citable) accession number: F2ISG4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: October 1, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3