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F2IQQ0 (F2IQQ0_VIBCL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
ORF Names:VCLMA_A1782 EMBL AEA78985.1
OrganismVibrio cholerae LMA3984-4 [Complete proteome] EMBL AEA78985.1
Taxonomic identifier935297 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length194 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F2IQQ0 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 30C4539AD0B297B2

FASTA19421,483
        10         20         30         40         50         60 
MAFELPALPY AKDALEPHIS AETLDFHHGK HHNTYVVKLN GLIPGTEFEN KSLEEIIKTS 

        70         80         90        100        110        120 
TGGIFNNAAQ VWNHTFYWHC LSPNGGGEPT GAVAEAINAA FGSFADFKAK FTDSAINNFG 

       130        140        150        160        170        180 
SSWTWLVKKA DGTLAITNTS NAATPLTEEG VTPLLTVDLW EHAYYIDYRN VRPDYMNGFW 

       190 
ALVNWDFVAQ NLAK 

« Hide

References

[1]"Whole genome sequencing of environmental Vibrio cholerae O1 from 10 nanograms of DNA using short reads."
Perez Chaparro P.J., McCulloch J.A., Cerdeira L.T., Al-Dilaimi A., Canto de Sa L.L., de Oliveira R., Tauch A., de Carvalho Azevedo V.A., Cruz Schneider M.P., da Silva A.L.
J. Microbiol. Methods 87:208-212(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]Chaparro J., Cerdeira L., Al-Dilaimi A., Barbosa M.S., de Oliveira R.S., Ranieri A., Garcia B., Coimbra N., Sa L.L.C., Tauch A., Schneider M.P., McCulloch J., Silva A.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: LMA3984-4 EMBL AEA78985.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002555 Genomic DNA. Translation: AEA78985.1.
RefSeqYP_005634383.1. NC_017270.1.

3D structure databases

ProteinModelPortalF2IQQ0.
SMRF2IQQ0. Positions 2-193.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA78985; AEA78985; VCLMA_A1782.
GeneID12267715.
KEGGvcl:VCLMA_A1782.
PATRIC54233931. VBIVibCho179000_1963.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK04564.

Enzyme and pathway databases

BioCycVCHO935297:GLMO-1855-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2IQQ0_VIBCL
AccessionPrimary (citable) accession number: F2IQQ0
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)