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Protein

Superoxide dismutase

Gene

VCLMA_A1782

Organism
Vibrio cholerae LMA3984-4
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciVCHO935297:GLMO-1855-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
ORF Names:VCLMA_A1782Imported
OrganismiVibrio cholerae LMA3984-4Imported
Taxonomic identifieri935297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000006792: Chromosome I

Structurei

3D structure databases

ProteinModelPortaliF2IQQ0.
SMRiF2IQQ0. Positions 2-193.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2IQQ0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAFELPALPY AKDALEPHIS AETLDFHHGK HHNTYVVKLN GLIPGTEFEN
60 70 80 90 100
KSLEEIIKTS TGGIFNNAAQ VWNHTFYWHC LSPNGGGEPT GAVAEAINAA
110 120 130 140 150
FGSFADFKAK FTDSAINNFG SSWTWLVKKA DGTLAITNTS NAATPLTEEG
160 170 180 190
VTPLLTVDLW EHAYYIDYRN VRPDYMNGFW ALVNWDFVAQ NLAK
Length:194
Mass (Da):21,483
Last modified:May 31, 2011 - v1
Checksum:i30C4539AD0B297B2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002555 Genomic DNA. Translation: AEA78985.1.
RefSeqiYP_005634383.1. NC_017270.1.

Genome annotation databases

EnsemblBacteriaiAEA78985; AEA78985; VCLMA_A1782.
GeneIDi12267715.
KEGGivcl:VCLMA_A1782.
PATRICi54233931. VBIVibCho179000_1963.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002555 Genomic DNA. Translation: AEA78985.1.
RefSeqiYP_005634383.1. NC_017270.1.

3D structure databases

ProteinModelPortaliF2IQQ0.
SMRiF2IQQ0. Positions 2-193.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEA78985; AEA78985; VCLMA_A1782.
GeneIDi12267715.
KEGGivcl:VCLMA_A1782.
PATRICi54233931. VBIVibCho179000_1963.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciVCHO935297:GLMO-1855-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMA3984-4Imported.

Entry informationi

Entry nameiF2IQQ0_VIBCL
AccessioniPrimary (citable) accession number: F2IQQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: January 7, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.