F2INQ1 (F2INQ1_VIBCL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase, eukaryotic type EMBL AEA78260.1

Gene names

ORF Names:

VCLMA_A1003 EMBL AEA78260.1

Organism

Vibrio cholerae LMA3984-4 EMBL AEA78260.1

Taxonomic identifier

935297 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio cholerae

Protein attributes

Sequence length	548 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2INQ1 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: ED7788009B600B58	FASTA	548	61,609
	10 20 30 40 50 60 MVSEHKSAQV NFDSLLKIFT VPEGPDSTLT KIDEELSRNL NHFLRKHIVA EEKPLKEIEK 70 80 90 100 110 120 DFSNAHIPEQ PQFVSDHTQH LLDTLVSHSV HTASPSFIGH MTSALPYFLM PLSKIMIALN 130 140 150 160 170 180 QNLVKIETSK AFTPLERQVL GMIHRLIYGE TDHFYQQWMH SAEHSLGAFC SGGTIANITA 190 200 210 220 230 240 LWVARNNALK AEGDFPGVEK AGLFKAMRHY GHEGLAILVS ERGHYSLKKA ADVLGIGQEG 250 260 270 280 290 300 LVAVKTDAHN RICPHDLEQK ITELKANKIK VFAVVGVAGT TETGNIDPLR TIAQICQREQ 310 320 330 340 350 360 IHFHIDAAWG GATLMSNRYR GLLDGVELAD SVTIDAHKQL YIPMGAGMVL FKDPNAMRSI 370 380 390 400 410 420 EHHAQYILRQ GSKDLGSHTL EGSRSGMAML VYASMHIISR PGYQLLIDQS IEKARYFADL 430 440 450 460 470 480 IDAQTDFELV SQPELCLLTY RYLPAHVRMA LEKSQGVQRA QLNELLNELT KFIQKKQRET 490 500 510 520 530 540 GKSFVSRTQL NPHQWDKLAT IVFRVVLANP LTTKEILHNV LDEQREIAQQ APKLMRQIEH LTQCILNQ

References

[1]	Chaparro J., Cerdeira L., Al-Dilaimi A., Barbosa M.S., de Oliveira R.S., Ranieri A., Garcia B., Coimbra N., Sa L.L.C., Tauch A., Schneider M.P., McCulloch J., Silva A. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: LMA3894-4 EMBL AEA78260.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002555 Genomic DNA. Translation: AEA78260.1.
RefSeq	YP_005633658.1. NC_017270.1.
3D structure databases
ProteinModelPortal	F2INQ1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEA78260; AEA78260; VCLMA_A1003.
GeneID	12268704.
KEGG	vcl:VCLMA_A1003.
PATRIC	54232108. VBIVibCho179000_1097.
Phylogenomic databases
KO	K01580.
Enzyme and pathway databases
BioCyc	VCHO935297:GLMO-1066-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F2INQ1_VIBCL

Accession

Primary (citable) accession number: F2INQ1

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	May 29, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)