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Protein
Submitted name:

Sialidase

Gene

VCLMA_A1545

Organism
Vibrio cholerae LMA3984-4
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
  2. sialic acid binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciVCHO935297:GLMO-1615-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
SialidaseImported
Gene namesi
ORF Names:VCLMA_A1545Imported
OrganismiVibrio cholerae LMA3984-4Imported
Taxonomic identifieri935297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000006792: Chromosome I

Family & Domainsi

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 2 hits.
2.60.120.200. 2 hits.
InterProiIPR013320. ConA-like_dom.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
IPR015344. VCNA_lectin-like_dom.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF09264. Sial-lect-inser. 2 hits.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 2 hits.
SSF50939. SSF50939. 2 hits.

Sequencei

Sequence statusi: Complete.

F2IM11-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFKNVKKTA LMLAMFGMAT SSNAALFDYN ATGDTEFDSP AKQGWMQDNT
60 70 80 90 100
NNGSGVLTNA DGMPAWLVQG NGGRAQWTYS LSTNQHAQAS SFGWRMTTEM
110 120 130 140 150
KVLSGGMITN YYANGTQRVL PIISLDSSGN LVVEFEGQTG RTILATGTAA
160 170 180 190 200
TEYHKFELVF LPGSNPSASF YFDGKLIRDN IQPTASKQNM IVWGNGSSNT
210 220 230 240 250
DGVAAYRDIK FEIQGDVIFR GPDRIPSIVA SSVTPGVVTA FAEKRVGGGD
260 270 280 290 300
PGALSNTNDI ITRTSRDGGI TWDTELNLTE QINVSDEFDF SDPRPIYDPS
310 320 330 340 350
TNTVLVSYAR WPTDAAQNGD RIKPWMPNGI FYSVYDVASG NWRAPIDVTD
360 370 380 390 400
QVKERSFQIA GWGGSELYRR NTNLNSQQDW QSNAKIRIVD GAANQIQVAD
410 420 430 440 450
GGRKYVFTLS IDESGSLVAN LNGVSDPIIL QSERAKVHSF HDYELQYSAL
460 470 480 490 500
NRSTTLFVDG QAITTWTGEV SQENNIQFGN ADAQIDGRLH VQNIALTQQG
510 520 530 540 550
QNLVEFDAFY LAQQTPEVEK DLEKLGWTKI KTGNTMSLYG NASVNPGPGH
560 570 580 590 600
GITLTRQQNI SGSQNGRLIY PAIVLDRFFL NVMSIYSDDG GSNWQTGSTL
610 620 630 640 650
PIPFRWKSSS ILETLEPSEA DMVELQNGDL LLTARLDFNQ IVNGVNYSPR
660 670 680 690 700
QQFLSKDGGI TWSLLEANNA NVFSNISTGT VDASITRFEQ SDGSHFLLFT
710 720 730 740 750
NPQGNPAGTN GRQNLGLWFS FDEGVTWKGP IQLVNGASAY SDIYQLDSEN
760 770 780
VIVIVETDNS NMRILRLPIT LLKQKLTLSQ N
Length:781
Mass (Da):85,741
Last modified:May 31, 2011 - v1
Checksum:i8452002280ACB762
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002555 Genomic DNA. Translation: AEA78761.1.
RefSeqiYP_005634159.1. NC_017270.1.

Genome annotation databases

EnsemblBacteriaiAEA78761; AEA78761; VCLMA_A1545.
GeneIDi12268817.
KEGGivcl:VCLMA_A1545.
PATRICi54233392. VBIVibCho179000_1704.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002555 Genomic DNA. Translation: AEA78761.1.
RefSeqiYP_005634159.1. NC_017270.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEA78761; AEA78761; VCLMA_A1545.
GeneIDi12268817.
KEGGivcl:VCLMA_A1545.
PATRICi54233392. VBIVibCho179000_1704.

Phylogenomic databases

KOiK01186.

Enzyme and pathway databases

BioCyciVCHO935297:GLMO-1615-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 2 hits.
2.60.120.200. 2 hits.
InterProiIPR013320. ConA-like_dom.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
IPR015344. VCNA_lectin-like_dom.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF09264. Sial-lect-inser. 2 hits.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 2 hits.
SSF50939. SSF50939. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LMA3984-4Imported.

Entry informationi

Entry nameiF2IM11_VIBCL
AccessioniPrimary (citable) accession number: F2IM11
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: January 7, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.