F2IB79 (F2IB79_FLUTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Site-2 protease EMBL AEA43165.1

Gene names

Ordered Locus Names:

Fluta_1170

Organism

Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) [Complete proteome] [HAMAP] EMBL AEA43165.1

Taxonomic identifier

755732 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Cryomorphaceae › Fluviicola › Fluviicola taffensis

Protein attributes

Sequence length	444 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Zinc By similarity. SAAS SAAS004387
Sequence similarities	Contains 1 PDZ (DHR) domain.

Ontologies

Keywords
Cellular component	Cell membrane SAAS SAAS004387 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS004387
Ligand	Zinc SAAS SAAS004387
Molecular function	Hydrolase Metalloprotease SAAS SAAS004387 Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F2IB79 [UniParc]. Last modified May 31, 2011. Version 1. Checksum: D6EBB3D5675A2522	FASTA	444	50,177
	10 20 30 40 50 60 MDFWVRAAQL ILSLSFLIVI HEFGHYLPAK WFNTRVEKFY LFFNPYFSVF KKKIGETEWG 70 80 90 100 110 120 LGWIPLGGYV KIAGMVDESM DTEQLAQPAQ PWEFRSKPAW QRLIIMLGGI IVNVVVGFLI 130 140 150 160 170 180 YIMVIFVWGE EKVDHNKLQN GIAVHPYFEQ FGFQSGDKVL SVNGEKADEL NKLGMEIMIF 190 200 210 220 230 240 GKTHFKVQHK DGKIQTINLP EDIGNKMWEN NAEAAFSFRY FNEGIDSVIP KSAAERIGLK 250 260 270 280 290 300 KGDKIVGING NKFVFFDEIT TSIYKNRGKK CELEIQSGDS IRSKEVKIAK DGKLGFYPKL 310 320 330 340 350 360 LNVSTDTNAI YTQHYSLGES FGSGISKGYK SLYANLAQFK YVFSKKGANS IGGVGSIGKL 370 380 390 400 410 420 FPPTWNWQAF WTLTAFLSMM LAIMNLLPIP ALDGGHVMFL LYEIITGRTP GQKFMEYAQY 430 440 VGFFLLLGLI LYANGKDLIG AFTN

References

[1]

"The complete genome of Fluviicola taffensis DSM 16823." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Pagani I., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Markowitz V. , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 16823 / RW262 / RW262.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002542 Genomic DNA. Translation: AEA43165.1.
RefSeq	YP_004344003.1. NC_015321.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEA43165; AEA43165; Fluta_1170.
GeneID	10396517.
KEGG	fte:Fluta_1170.
PATRIC	54416657. VBIFluTaf147081_1186.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K11749.
OMA	IIFIHEL.
Enzyme and pathway databases
BioCyc	FTAF755732:GHMH-1192-MONOMER.
Family and domain databases
InterPro	IPR001478. PDZ. IPR004387. Pept_M50_Zn. IPR008915. Peptidase_M50. [Graphical view]
Pfam	PF00595. PDZ. 1 hit. PF02163. Peptidase_M50. 1 hit. [Graphical view]
SMART	SM00228. PDZ. 1 hit. [Graphical view]
SUPFAM	SSF50156. PDZ. 1 hit.
TIGRFAMs	TIGR00054. TIGR00054. 1 hit.
ProtoNet	Search...

Entry information

Entry name

F2IB79_FLUTR

Accession

Primary (citable) accession number: F2IB79

Entry history

Integrated into UniProtKB/TrEMBL:	May 31, 2011
Last sequence update:	May 31, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)