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F2I1J9

- F2I1J9_PELSM

UniProt

F2I1J9 - F2I1J9_PELSM

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Protein

Elongation factor Tu

Gene

tuf

Organism
Pelagibacter sp. (strain IMCC9063)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi83 – 875GTPUniRule annotation
Nucleotide bindingi138 – 1414GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciCPEL1002672:GHAA-1266-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
Ordered Locus Names:SAR11G3_01238Imported
OrganismiPelagibacter sp. (strain IMCC9063)Imported
Taxonomic identifieri1002672 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSAR11 clusterCandidatus Pelagibacter
ProteomesiUP000009181: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F2I1J9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSKEKFNRSK PHCNIGTIGH VDHGKTTLTA AITKVLSTAE GSSATFSAYD
60 70 80 90 100
QIDKSPEEKE RGITISTAHV EYETPARHYA HVDCPGHADY VKNMITGAAQ
110 120 130 140 150
MDGAILVVNA ADGPMPQTRE HILLARQVGV PSLVVFLNKC DTVDDKELLE
160 170 180 190 200
LVEMEIRELL TSYKYPGDTI PIIKGSALKA LEGDAEMGIK PILELMKAVD
210 220 230 240 250
ETIPQPARPI EKPFLMPIED VFSISGRGTV VTGRIELGQV KTGEEIEIIG
260 270 280 290 300
IKETQKSVCT GVEMFRKLLD SGEAGDNVGI LLRGIERDQV ERGQVLAKPG
310 320 330 340 350
SIKPHTKFEA QAYILKKEEG GRHTPFFTKY RPQFYFRTTD VTGEVTLPEG
360 370 380 390
TEMIMPGDDA KMTVTLINPI AMDENLKFAI REGGRTVGAG VVTKVIE
Length:397
Mass (Da):43,461
Last modified:May 31, 2011 - v1
Checksum:i421B0A6F54444436
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002511 Genomic DNA. Translation: AEA81713.1.
RefSeqiWP_013695878.1. NC_015380.1.
YP_004358452.1. NC_015380.1.

Genome annotation databases

EnsemblBacteriaiAEA81713; AEA81713; SAR11G3_01238.
GeneIDi10476252.
KEGGipel:SAR11G3_01238.
PATRICi54522083. VBICanPel201843_1227.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002511 Genomic DNA. Translation: AEA81713.1 .
RefSeqi WP_013695878.1. NC_015380.1.
YP_004358452.1. NC_015380.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEA81713 ; AEA81713 ; SAR11G3_01238 .
GeneIDi 10476252.
KEGGi pel:SAR11G3_01238.
PATRICi 54522083. VBICanPel201843_1227.

Phylogenomic databases

KOi K02358.

Enzyme and pathway databases

BioCyci CPEL1002672:GHAA-1266-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of strain IMCC9063, belonging to SAR11 subgroup 3, isolated from the Arctic Ocean."
    Oh H.M., Kang I., Lee K., Jang Y., Lim S.I., Cho J.C.
    J. Bacteriol. 193:3379-3380(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: IMCC9063Imported.

Entry informationi

Entry nameiF2I1J9_PELSM
AccessioniPrimary (citable) accession number: F2I1J9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: October 29, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3