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F2I0G9 (F2I0G9_PELSM) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Chromosome partition protein Smc HAMAP-Rule MF_01894
Gene names
Name:smc HAMAP-Rule MF_01894
Ordered Locus Names:SAR11G3_00699 EMBL AEA81174.1
OrganismPelagibacter sp. (strain IMCC9063) [Complete proteome] [HAMAP]
Taxonomic identifier1002672 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › SAR11 cluster › Candidatus Pelagibacter

Protein attributes

Sequence length881 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Required for chromosome condensation and partitioning By similarity. HAMAP-Rule MF_01894

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_01894

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_01894.

Domain

Contains large globular domains required for ATP hydrolysis at each terminus and a third globular domain forming a flexible hinge near the middle of the molecule. These domains are separated by coiled-coil structures By similarity. HAMAP-Rule MF_01894

Sequence similarities

Belongs to the SMC family. HAMAP-Rule MF_01894

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding32 – 398ATP By similarity HAMAP-Rule MF_01894
Coiled coil170 – 721552 By similarity HAMAP-Rule MF_01894

Sequences

Sequence LengthMass (Da)Tools
F2I0G9 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 2D5167813DFAEC0E

FASTA88199,708
        10         20         30         40         50         60 
MKFKQLEVVG FKSFADKTSF YFEDGLTGIV GPNGCGKSNI VEALRWCMGE TSAKSLRGSG 

        70         80         90        100        110        120 
MEDVIFSGTT SRPSKNLSEV ALKLENDNRL PQFKDMPEIE VRRKIEKDKG SKYFLNGREV 

       130        140        150        160        170        180 
RAKDVQILFA DLSTGPHSPS MVSQGRVGSL VTAKPTDRRA ILEEAAGIGG LHVRRHEAEL 

       190        200        210        220        230        240 
RLTAAENNLK KADDIMKQIE NQLKNLLKQA EEATKYKDMS NNIRSLEAKL VYFQSQEIEG 

       250        260        270        280        290        300 
SILGAQEELS EVEDEISAVN IDKNFNENAL KEEGKEIKPL RDENAELNSK LQRLNLEFEQ 

       310        320        330        340        350        360 
ISEEENRAKN EIEKIKKEIK QINIDIDREK QIVNDATSNE KRLSAEKNDI LEINQNSSEI 

       370        380        390        400        410        420 
EEKANNSYQE SLKELNQEQD LLNKLSDKIF SQIGGFDFNL IKNKTDQLSS SIKEVALRLK 

       430        440        450        460        470        480 
KLSGENDELD SGAIKNRIDE IQNEFIKMED LADKINFDLE AAAPQANLNS DTTNALKNEF 

       490        500        510        520        530        540 
IEKIKTISEL QEKYASRLSK YESIKQEVTK RKERLSIIES EIKNWIDLKE NSEKKFLELN 

       550        560        570        580        590        600 
ERFKENENAL SQEEAKPGSI AEKKGTYVQN IKNIEEDVLQ INEKLISKED SVQSINQKLY 

       610        620        630        640        650        660 
DINTTVLGIT ERKVRAQTII EGLKEKKKEI ELKSLTDFKH PIAELSTFAE IDVDEKVKTS 

       670        680        690        700        710        720 
EIENQIQKLK DRRERMGAVN LRADNETQEL QDQIDRMMND RKDLVQGIQK LKSSINDLNE 

       730        740        750        760        770        780 
KGRERLLDAF EKVSRKFNDV YTKLFAGGNA RLELIESDDP LEAGLELLVS PPGKKLQSIT 

       790        800        810        820        830        840 
LLSGGEQALT AMALIFAVFL INPSPICILD EVDAPLDDAN VTRFCSLLDE LSSVTDTKFV 

       850        860        870        880 
VITHHALTMS RMNRLYGVTM AERGVSQLVA VDLEKAEGMV A

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References

[1]"Complete genome sequence of strain IMCC9063, belonging to SAR11 subgroup 3, isolated from the Arctic Ocean."
Oh H.M., Kang I., Lee K., Jang Y., Lim S.I., Cho J.C.
J. Bacteriol. 193:3379-3380(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: IMCC9063 EMBL AEA81174.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002511 Genomic DNA. Translation: AEA81174.1.
RefSeqYP_004357913.1. NC_015380.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA81174; AEA81174; SAR11G3_00699.
GeneID10475699.
KEGGpel:SAR11G3_00699.
PATRIC54520960. VBICanPel201843_0690.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03529.

Enzyme and pathway databases

BioCycCPEL1002672:GHAA-713-MONOMER.

Family and domain databases

HAMAPMF_01894. Smc_prok.
InterProIPR003395. RecF/RecN/SMC.
IPR024704. SMC.
IPR011890. SMC_prok.
[Graphical view]
PfamPF02463. SMC_N. 1 hit.
[Graphical view]
PIRSFPIRSF005719. SMC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF2I0G9_PELSM
AccessionPrimary (citable) accession number: F2I0G9
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info