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F2GCW9 (F2GCW9_ALTMD) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribose-5-phosphate isomerase A HAMAP-Rule MF_00170
EC=5.3.1.6 HAMAP-Rule MF_00170
Alternative name(s):
Phosphoriboisomerase A HAMAP-Rule MF_00170
Gene names
Name:rpiA HAMAP-Rule MF_00170
Ordered Locus Names:MADE_1014910
OrganismAlteromonas macleodii (strain DSM 17117 / Deep ecotype) [Complete proteome] [HAMAP] EMBL AEA99116.1
Taxonomic identifier314275 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Alteromonas ›

Protein attributes

Sequence length218 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
F2GCW9 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 94A173C7404FB4A3

FASTA21823,241
        10         20         30         40         50         60 
MDQNAKKQAV AKAAIDYVES DSIVGVGTGS TVNFFIEELG KIKHKIEGAV SSSEASTARL 

        70         80         90        100        110        120 
KALGIEVFAL NEVSNLSVYI DGADEVTEHK HMIKGGGAAL TREKIVAGAA TTFVCIVDET 

       130        140        150        160        170        180 
KRVPVLGAFP LPVEVIPMAR SFVARELVKL GGDPEYRQGV ITDNGNVILD VHNLEILNPR 

       190        200        210 
ELEQKINNIP GVVTNGIFAL RGADIVLSAT ENGVETFK

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References

[1]"Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
Ivars-Martinez E., Martin-Cuadrado A.B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17117 / Deep ecotype.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001103 Genomic DNA. Translation: AEA99116.1.
RefSeqYP_004428114.1. NC_011138.2.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA99116; AEA99116; MADE_1014910.
GeneID10558334.
KEGGamc:MADE_1014910.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01807.

Enzyme and pathway databases

BioCycAMAC314275:GHA7-3017-MONOMER.
UniPathwayUPA00115; UER00412.

Family and domain databases

HAMAPMF_00170. Rib_5P_isom_A.
InterProIPR004788. Ribose5P_isomerase_typA.
IPR020672. Ribose5P_isomerase_typA_subgr.
[Graphical view]
PANTHERPTHR11934. PTHR11934. 1 hit.
PfamPF06026. Rib_5-P_isom_A. 1 hit.
[Graphical view]
TIGRFAMsTIGR00021. rpiA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF2GCW9_ALTMD
AccessionPrimary (citable) accession number: F2GCW9
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info