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F2G682 (F2G682_ALTMD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:MADE_1018450 EMBL AEA99814.1
OrganismAlteromonas macleodii (strain DSM 17117 / Deep ecotype) [Complete proteome] [HAMAP] EMBL AEA99814.1
Taxonomic identifier314275 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas

Protein attributes

Sequence length544 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F2G682 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 946C502265C4F213

FASTA54460,135
        10         20         30         40         50         60 
MGEAQVSLEH LFRVFTKPEH KDSKLAQIEQ HLSDNILDFL SQHVVTKKTS LEEIEKDFSD 

        70         80         90        100        110        120 
SKVPESPEFV STHAESLLDK LVAHSVNTYS PTFIGHMTSA LPYFHLPLSK LMVGLNQNLV 

       130        140        150        160        170        180 
KIETSKAFTP LERQVLGMMH NLVYDQPQRF YDNHLHSAAH SLGAFCSGGT IANITALWVA 

       190        200        210        220        230        240 
RNKLLGPQDG FCGVAKAGLA AAYRHLDINN LGVMCSKRGH YSLSKAVDVL GLGRDQLLTI 

       250        260        270        280        290        300 
PAPRQTLDPA KALRIGKRYQ EEGNKLLAIV GVGGTTETGH VDPLDELADV ANELGCWFHV 

       310        320        330        340        350        360 
DAAWGGATLF SSRYRDRLKG IERADSVTID AHKQMYVPMG AGMALFKDPQ NANAVRHHAQ 

       370        380        390        400        410        420 
YILRAGSKDL GATTLEGSRN GMAMMVYSAL HIFGRKGYEL LIDRSIDKAK DFSHMIDKAG 

       430        440        450        460        470        480 
DFELTTTPTL SLLTYRVCPE EVQEKLKHAD ANMRNAINEK VDALVVAVQK QQREAGKSFV 

       490        500        510        520        530        540 
SRTRLEAPDY PSQCITVFRV VLANPLTSHN DLAAILAEQH LIAKETQAWA ELMNFVRDSE 


KVAS 

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References

[1]"Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
Ivars-Martinez E., Martin-Cuadrado A.B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17117 / Deep ecotype.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001103 Genomic DNA. Translation: AEA99814.1.
RefSeqYP_004428812.1. NC_011138.3.

3D structure databases

ProteinModelPortalF2G682.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEA99814; AEA99814; MADE_1018450.
GeneID10559036.
KEGGamc:MADE_1018450.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.
OMAGMMHNLV.

Enzyme and pathway databases

BioCycAMAC314275:GHA7-3529-MONOMER.
AMAC314275:GHA7-3722-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF2G682_ALTMD
AccessionPrimary (citable) accession number: F2G682
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: June 11, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)