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F2G682

- F2G682_ALTMD

UniProt

F2G682 - F2G682_ALTMD

Protein
Submitted name:

Glutamate decarboxylase

Gene

MADE_1018450

Organism
Alteromonas macleodii (strain DSM 17117 / Deep ecotype)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciAMAC314275:GHA7-3529-MONOMER.
    AMAC314275:GHA7-3722-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glutamate decarboxylaseImported
    Gene namesi
    Ordered Locus Names:MADE_1018450Imported
    OrganismiAlteromonas macleodii (strain DSM 17117 / Deep ecotype)Imported
    Taxonomic identifieri314275 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeAlteromonas
    ProteomesiUP000001870: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF2G682.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.
    OMAiGMMHNLV.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    F2G682-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGEAQVSLEH LFRVFTKPEH KDSKLAQIEQ HLSDNILDFL SQHVVTKKTS    50
    LEEIEKDFSD SKVPESPEFV STHAESLLDK LVAHSVNTYS PTFIGHMTSA 100
    LPYFHLPLSK LMVGLNQNLV KIETSKAFTP LERQVLGMMH NLVYDQPQRF 150
    YDNHLHSAAH SLGAFCSGGT IANITALWVA RNKLLGPQDG FCGVAKAGLA 200
    AAYRHLDINN LGVMCSKRGH YSLSKAVDVL GLGRDQLLTI PAPRQTLDPA 250
    KALRIGKRYQ EEGNKLLAIV GVGGTTETGH VDPLDELADV ANELGCWFHV 300
    DAAWGGATLF SSRYRDRLKG IERADSVTID AHKQMYVPMG AGMALFKDPQ 350
    NANAVRHHAQ YILRAGSKDL GATTLEGSRN GMAMMVYSAL HIFGRKGYEL 400
    LIDRSIDKAK DFSHMIDKAG DFELTTTPTL SLLTYRVCPE EVQEKLKHAD 450
    ANMRNAINEK VDALVVAVQK QQREAGKSFV SRTRLEAPDY PSQCITVFRV 500
    VLANPLTSHN DLAAILAEQH LIAKETQAWA ELMNFVRDSE KVAS 544
    Length:544
    Mass (Da):60,135
    Last modified:May 31, 2011 - v1
    Checksum:i946C502265C4F213
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001103 Genomic DNA. Translation: AEA99814.1.
    RefSeqiYP_004428812.1. NC_011138.3.

    Genome annotation databases

    EnsemblBacteriaiAEA99814; AEA99814; MADE_1018450.
    GeneIDi10559036.
    KEGGiamc:MADE_1018450.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001103 Genomic DNA. Translation: AEA99814.1 .
    RefSeqi YP_004428812.1. NC_011138.3.

    3D structure databases

    ProteinModelPortali F2G682.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEA99814 ; AEA99814 ; MADE_1018450 .
    GeneIDi 10559036.
    KEGGi amc:MADE_1018450.

    Phylogenomic databases

    KOi K01580.
    OMAi GMMHNLV.

    Enzyme and pathway databases

    BioCyci AMAC314275:GHA7-3529-MONOMER.
    AMAC314275:GHA7-3722-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter."
      Ivars-Martinez E., Martin-Cuadrado A.-B., D'Auria G., Mira A., Ferriera S., Johnson J., Friedman R., Rodriguez-Valera F.
      ISME J. 2:1194-1212(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17117 / Deep ecotypeImported.

    Entry informationi

    Entry nameiF2G682_ALTMD
    AccessioniPrimary (citable) accession number: F2G682
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3