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F2F5S8 (F2F5S8_SOLSS) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SSIL_2188 EMBL BAK16611.1
OrganismSolibacillus silvestris (strain StLB046) (Bacillus silvestris) [Complete proteome] [HAMAP] EMBL BAK16611.1
Taxonomic identifier1002809 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPlanococcaceaeSolibacillus

Protein attributes

Sequence length613 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F2F5S8 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 440F9CD712996D36

FASTA61371,318
        10         20         30         40         50         60 
MKPMLLTDVP DIPLGDDWLY EAKYDGYRCI LVWDKGKNIP EMKSRNGNVL NEKFPEIIRF 

        70         80         90        100        110        120 
CKSIYAEIEP YLPLIFDGEI VYLINHFQSK FSFVQKRGKM TNQKNIESNA KTFPCHYIVF 

       130        140        150        160        170        180 
DLLKLKGKDK GNSRLTTRKQ LLSDLFERLN LLDTVQYNDP KRLQAIDVFE DPHLIWQKVT 

       190        200        210        220        230        240 
SHNGEGIIAK KRSSKWLENT RTKSWQKIKN WKHVNVILTK FDQLNGFFNG AIYQEDMLME 

       250        260        270        280        290        300 
VVSFKHGLSE EESKTLIAFF KSKGTVKEKS IFEIPPSICV TVACIDFDGS KLREPRFHSF 

       310        320        330        340        350        360 
QHHLDVTECN WQQMQRQLNP IPESVIVTHP DKPVFPASHI TKDDYLYYLQ TVAPMMMPFL 

       370        380        390        400        410        420 
QDRLLTVIRY PHGVPGESFY QKNYIENLPE FITTQLVDDT HFILCNNLES LLWLGNQLAL 

       430        440        450        460        470        480 
EFHIPFQPVT SEQPTEIVFD LDPPSVHEFG LAVDAAVKFK TIMDYFKLTS FIKTSGGKGM 

       490        500        510        520        530        540 
QIYIPLPLHT FSYEDTGVFT EFICRFLVQQ FPNSFTIERL KKNRGKRLYL DYVQHREGKT 

       550        560        570        580        590        600 
IVAPYSPRGN NKGLIATPLL WEEVNEGLTP DLFTIPNIIK RLERMADPFK NFREVGERQP 

       610 
FRAALDQITG KQV 

« Hide

References

[1]"Genome sequence of Solibacillus silvestris StLB046."
Morohoshi T., Someya N., Ikeda T.
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: StLB046.
[2]"Complete genome sequence and characterization of the N-acylhomoserine lactone-degrading gene of the potato leaf-associated Solibacillus silvestris."
Morohoshi T., Tominaga Y., Someya N., Ikeda T.
J. Biosci. Bioeng. 113:20-25(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: StLB046 EMBL BAK16611.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012157 Genomic DNA. Translation: BAK16611.1.
RefSeqYP_006462757.1. NC_018065.1.

3D structure databases

ProteinModelPortalF2F5S8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK16611; BAK16611; SSIL_2188.
GeneID13227142.
KEGGsiv:SSIL_2188.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2F5S8_SOLSS
AccessionPrimary (citable) accession number: F2F5S8
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: July 9, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)