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F2F5S8

- F2F5S8_SOLSS

UniProt

F2F5S8 - F2F5S8_SOLSS

Protein
Submitted name:

Predicted eukaryotic-type DNA primase

Gene

SSIL_2188

Organism
Solibacillus silvestris (strain StLB046) (Bacillus silvestris)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 10 (01 Oct 2014)
      Sequence version 1 (31 May 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Predicted eukaryotic-type DNA primaseImported
    Gene namesi
    Ordered Locus Names:SSIL_2188Imported
    OrganismiSolibacillus silvestris (strain StLB046) (Bacillus silvestris)Imported
    Taxonomic identifieri1002809 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPlanococcaceaeSolibacillus
    ProteomesiUP000006691: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliF2F5S8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F2F5S8-1 [UniParc]FASTAAdd to Basket

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    MKPMLLTDVP DIPLGDDWLY EAKYDGYRCI LVWDKGKNIP EMKSRNGNVL    50
    NEKFPEIIRF CKSIYAEIEP YLPLIFDGEI VYLINHFQSK FSFVQKRGKM 100
    TNQKNIESNA KTFPCHYIVF DLLKLKGKDK GNSRLTTRKQ LLSDLFERLN 150
    LLDTVQYNDP KRLQAIDVFE DPHLIWQKVT SHNGEGIIAK KRSSKWLENT 200
    RTKSWQKIKN WKHVNVILTK FDQLNGFFNG AIYQEDMLME VVSFKHGLSE 250
    EESKTLIAFF KSKGTVKEKS IFEIPPSICV TVACIDFDGS KLREPRFHSF 300
    QHHLDVTECN WQQMQRQLNP IPESVIVTHP DKPVFPASHI TKDDYLYYLQ 350
    TVAPMMMPFL QDRLLTVIRY PHGVPGESFY QKNYIENLPE FITTQLVDDT 400
    HFILCNNLES LLWLGNQLAL EFHIPFQPVT SEQPTEIVFD LDPPSVHEFG 450
    LAVDAAVKFK TIMDYFKLTS FIKTSGGKGM QIYIPLPLHT FSYEDTGVFT 500
    EFICRFLVQQ FPNSFTIERL KKNRGKRLYL DYVQHREGKT IVAPYSPRGN 550
    NKGLIATPLL WEEVNEGLTP DLFTIPNIIK RLERMADPFK NFREVGERQP 600
    FRAALDQITG KQV 613
    Length:613
    Mass (Da):71,318
    Last modified:May 31, 2011 - v1
    Checksum:i440F9CD712996D36
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012157 Genomic DNA. Translation: BAK16611.1.
    RefSeqiYP_006462757.1. NC_018065.1.

    Genome annotation databases

    EnsemblBacteriaiBAK16611; BAK16611; SSIL_2188.
    GeneIDi13227142.
    KEGGisiv:SSIL_2188.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012157 Genomic DNA. Translation: BAK16611.1 .
    RefSeqi YP_006462757.1. NC_018065.1.

    3D structure databases

    ProteinModelPortali F2F5S8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAK16611 ; BAK16611 ; SSIL_2188 .
    GeneIDi 13227142.
    KEGGi siv:SSIL_2188.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Solibacillus silvestris StLB046."
      Morohoshi T., Someya N., Ikeda T.
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: StLB046Imported.
    2. "Complete genome sequence and characterization of the N-acylhomoserine lactone-degrading gene of the potato leaf-associated Solibacillus silvestris."
      Morohoshi T., Tominaga Y., Someya N., Ikeda T.
      J. Biosci. Bioeng. 113:20-25(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: StLB046Imported.

    Entry informationi

    Entry nameiF2F5S8_SOLSS
    AccessioniPrimary (citable) accession number: F2F5S8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 31, 2011
    Last sequence update: May 31, 2011
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3