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F2ER56 (F2ER56_PANAA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tufA EMBL BAK13449.1
Synonyms:tuf HAMAP-Rule MF_00118
Ordered Locus Names:PAJ_2853 EMBL BAK12933.1, PAJ_3369 EMBL BAK13449.1
OrganismPantoea ananatis (strain AJ13355) [Complete proteome] [HAMAP]
Taxonomic identifier932677 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
F2ER56 [UniParc].

Last modified May 31, 2011. Version 1.
Checksum: 4406FB29AF271AEA

FASTA39443,154
        10         20         30         40         50         60 
MAKEQFQRNK LHVNVGTIGH VDHGKTTLTA AITTVLAKTN GGQARAFDQI DSTPEEKARG 

        70         80         90        100        110        120 
ITINTAHVEY ETPSRHYAHV DCPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTREHI 

       130        140        150        160        170        180 
LLGRQVGVPY IIVFLNKCDM VDDEELLELV EMEVRDLLSQ YDFPGDDTPI VRGSALKALE 

       190        200        210        220        230        240 
GNPEWEEKIV ELAGHLDNYI PDPVRAIDMP FLLPIEDVFS ISGRGTVVTG RVERGIVKVG 

       250        260        270        280        290        300 
DEVEIVGIKD TAKSTCTGVE MFRKLLDQGQ AGENCGVLLR GIKREDIQRG QVLAKPGSIK 

       310        320        330        340        350        360 
PHTKFESEVY VLSKDEGGRH TPFFKGYRPQ FYFRTTDVTG SVELPEGVEM VMPGDNIKMV 

       370        380        390 
VTLIHPIAMD EGLRFAIREG GRTVGAGVVA KVIA 

« Hide

References

[1]"Genome sequence of Pantoea ananatis AJ13355."
Hara Y.
Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AJ13355 EMBL BAK13449.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012032 Genomic DNA. Translation: BAK12933.1.
AP012032 Genomic DNA. Translation: BAK13449.1.
RefSeqYP_005935729.1. NC_017531.1.
YP_005936245.1. NC_017531.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAK12933; BAK12933; PAJ_2853.
BAK13449; BAK13449; PAJ_3369.
GeneID12526174.
12526711.
KEGGpaj:PAJ_2853.
paj:PAJ_3369.
PATRIC54226884. VBIPanAna188453_3324.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.
OMASHIEYST.

Enzyme and pathway databases

BioCycPANA932677:GLI8-2895-MONOMER.
PANA932677:GLI8-3432-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF2ER56_PANAA
AccessionPrimary (citable) accession number: F2ER56
Entry history
Integrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)