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Protein

Acyl-[acyl-carrier-protein] desaturase

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Introduction of a cis double bond between carbons of the acyl chain.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Fe cationUniRule annotationNote: Binds 2 iron ions per subunit.UniRule annotation
  • Fe2+UniRule annotationNote: Binds 2 Fe2+ ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi126Iron 1UniRule annotation1
Metal bindingi165Iron 1UniRule annotation1
Metal bindingi165Iron 2UniRule annotation1
Metal bindingi168Iron 1; via pros nitrogenUniRule annotation1
Metal bindingi218Iron 2UniRule annotation1
Metal bindingi251Iron 1UniRule annotation1
Metal bindingi251Iron 2UniRule annotation1
Metal bindingi254Iron 2; via pros nitrogenUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
Biological processFatty acid biosynthesisUniRule annotation, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism
LigandIronUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Acyl-[acyl-carrier-protein] desaturaseUniRule annotation (EC:1.14.19.-UniRule annotation)
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChloroplastUniRule annotation, Plastid

Expressioni

Gene expression databases

ExpressionAtlasiF2ECS0 baseline

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the fatty acid desaturase type 2 family.UniRule annotation

Family and domain databases

CDDicd01050 Acyl_ACP_Desat, 1 hit
Gene3Di1.10.620.20, 1 hit
InterProiView protein in InterPro
IPR005803 FADS-2_CS
IPR005067 Fatty_acid_desaturase-2
IPR009078 Ferritin-like_SF
IPR012348 RNR-like
PANTHERiPTHR31155 PTHR31155, 1 hit
PfamiView protein in Pfam
PF03405 FA_desaturase_2, 1 hit
PIRSFiPIRSF000346 Dlt9_acylACP_des, 1 hit
SUPFAMiSSF47240 SSF47240, 1 hit
PROSITEiView protein in PROSITE
PS00574 FATTY_ACID_DESATUR_2, 1 hit

Sequencei

Sequence statusi: Complete.

F2ECS0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYLMACMPSC GTFHAPLVSS CLRRKFTVVA TASKAKVGTP GKAFTQVQFA
60 70 80 90 100
QPFPPEKKEV FDSLERWAED NILVLLKPVQ KSWQPQDYLP DPSSDGFYDE
110 120 130 140 150
VKELRERAKE IPDDYLVCLV GDMVTEEALP TYQTMLNILD GGVGDDTGTS
160 170 180 190 200
PASWAVWTRA WTAEENRHGD LMNKYMYLTG RVDMRQIEKT IQYLLGAGMD
210 220 230 240 250
PKTEGNPYQG YIYTSFQERA TFISHGNTAR HARKYGDLKL AQVCGTIAAD
260 270 280 290 300
EKRHETAYTK IVEKLFEVDP DYTVLAFAAM MRKKVTMPAH LMYDGQDDNL
310 320 330 340 350
FEHFSAVAQR LGVYTAMDYA DILEFLVQRW NVANLTGLSG EGRRAQDFLC
360 370 380
SLGPRFRKLE ERAQGRAKQL PVVPFSWIHG RQVQL
Length:385
Mass (Da):43,660
Last modified:May 31, 2011 - v1
Checksum:i10F880EC93C11D23
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK373945 mRNA Translation: BAK05142.1

Similar proteinsi

Entry informationi

Entry nameiF2ECS0_HORVV
AccessioniPrimary (citable) accession number: F2ECS0
Entry historyiIntegrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: May 23, 2018
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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