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Protein
Submitted name:

Predicted protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei239 – 260HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

ExpressionAtlasiF2DX59 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliF2DX59
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

CDDicd00683 Trans_IPPS_HH, 1 hit
Gene3Di1.10.600.10, 1 hit
InterProiView protein in InterPro
IPR008949 Isoprenoid_synthase_dom_sf
IPR002060 Squ/phyt_synthse
IPR006449 Squal_synth-like
IPR019845 Squalene/phytoene_synthase_CS
IPR033904 Trans_IPPS_HH
PfamiView protein in Pfam
PF00494 SQS_PSY, 1 hit
SUPFAMiSSF48576 SSF48576, 1 hit
TIGRFAMsiTIGR01559 squal_synth, 1 hit
PROSITEiView protein in PROSITE
PS01044 SQUALEN_PHYTOEN_SYN_1, 1 hit
PS01045 SQUALEN_PHYTOEN_SYN_2, 1 hit

Sequencei

Sequence statusi: Complete.

F2DX59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGEGMAKFIC MEVQTIDDYD EYCHYVAGLV GYGLSRLFHA TGTEDLAPDH
60 70 80 90 100
LSNSMGLFLQ KTNIIRDYLE DINEIPKCRM FWPREIWSKY VDKLEDLKYE
110 120 130 140 150
ENSEKAVQCL NDMVTNALIH AHDCLQYMSA LKDNSNFRFC AIPQIMAIGT
160 170 180 190 200
CAICYNNVKV FRGVVKMRRG LTARIIDETK SISDVYSAFY EFSSLLESKI
210 220 230 240 250
DDNDPNAALT RKRVDAIKKT CKSSGLLKRR GYDLEKSKYR MPMLIMIVLL
260
LAAIILGVLY GK
Length:262
Mass (Da):29,956
Last modified:May 31, 2011 - v1
Checksum:iCE199AEABD3B1C17
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK368477 mRNA Translation: BAJ99680.1

Similar proteinsi

Entry informationi

Entry nameiF2DX59_HORVV
AccessioniPrimary (citable) accession number: F2DX59
Entry historyiIntegrated into UniProtKB/TrEMBL: May 31, 2011
Last sequence update: May 31, 2011
Last modified: May 23, 2018
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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