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F1SVL0 (F1SVL0_METKA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length984 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding1611Zinc PDB 4GFJ
Metal binding2461Zinc; via tele nitrogen PDB 4GFJ

Sequences

Sequence LengthMass (Da)Tools
F1SVL0 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 63ABCC55177571D6

FASTA984112,207
        10         20         30         40         50         60 
MALVYDAEFV GSEREFEEER ETFLKGVKAY DGVLATRYLM ERSSSAKNDE ELLELHQNFI 

        70         80         90        100        110        120 
LLTGSYACSI DPTEDRYQNV IVRGVNFDER VQRLSTGGSP ARYAIVYRRG WRAIAKALDI 

       130        140        150        160        170        180 
DEEDVPAIEV RAVKRNPLQP ALYRILVRYG RVDLMPVTVD EVPPEMAGEF ERLIERYDVP 

       190        200        210        220        230        240 
IDEKEERILE ILRENPWTPH DEIARRLGLS VSEVEGEKDP ESSGIYSLWS RVVVNIEYDE 

       250        260        270        280        290        300 
RTAKRHVKRR DRLLEELYEH LEELSERYLR HPLTRRWIVE HKRDIMRRYL EQRIVECALK 

       310        320        330        340        350        360 
LQDRYGIRED VALCLARAFD GSISMIATTP YRTLKDVCPD LTLEEAKSVN RTLATLIDEH 

       370        380        390        400        410        420 
GLSPDAADEL IEHFESIAGI LATDLEEIER MYEEGRLSEE AYRAAVEIQL AELTKKEGVG 

       430        440        450        460        470        480 
RKTAERLLRA FGNPERVKQL AREFEIEKLA SVEGVGERVL RSLVPGYASL ISIRGIDRER 

       490        500        510        520        530        540 
AERLLKKYGG YSKVREAGVE ELREDGLTDA QIRELKGLKT LESIVGDLEK ADELKRKYGS 

       550        560        570        580        590        600 
ASAVRRLPVE ELRELGFSDD EIAEIKGIPK KLREAFDLET AAELYERYGS LKEIGRRLSY 

       610        620        630        640        650        660 
DDLLELGATP KAAAEIKGPE FKFLLNIEGV GPKLAERILE AVDYDLERLA SLNPEELAEK 

       670        680        690        700        710        720 
VEGLGEELAE RVVYAARERV ESRRKSGRQE RSEEEWKEWL ERKVGEGRAR RLIEYFGSAG 

       730        740        750        760        770        780 
EVGKLVENAE VSKLLEVPGI GDEAVARLVP GYKTLRDAGL TPAEAERVLK RYGSVSKVQE 

       790        800        810        820        830        840 
GATPDELREL GLGDAKIARI LGLRSLVNKR LDVDTAYELK RRYGSVSAVR KAPVKELREL 

       850        860        870        880        890        900 
GLSDRKIARI KGIPETMLQV RGMSVEKAER LLERFDTWTK VKEAPVSELV RVPGVGLSLV 

       910        920        930        940        950        960 
KEIKAQVDPA WKALLDVKGV SPELADRLVE ELGSPYRVLT AKKSDLMRVE RVGPKLAERI 

       970        980 
RAAGKRYVEE RRSRRERIRR KLRG 

« Hide

References

« Hide 'large scale' references
[1]"The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens."
Slesarev A.I., Mezhevaya K.V., Makarova K.S., Polushin N.N., Shcherbinina O.V., Shakhova V.V., Belova G.I., Aravind L., Natale D.A., Rogozin I.B., Tatusov R.L., Wolf Y.I., Stetter K.O., Malykh A.G., Koonin E.V., Kozyavkin S.A.
Proc. Natl. Acad. Sci. U.S.A. 99:4644-4649(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AV19 / DSM 6324 / JCM 9639 / NBRC 100938.
[2]"Identification of one of the apurinic/apyrimidinic lyase active sites of topoisomerase V by structural and functional studies."
Rajan R., Prasad R., Taneja B., Wilson S.H., Mondragon A.
Nucleic Acids Res. 41:657-666(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.91 ANGSTROMS) OF 1-685 IN COMPLEX WITH ZINC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE009439 Genomic DNA. Translation: AAM02649.1.
RefSeqNP_614719.1. NC_003551.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4GFJX-ray2.91A1-685[»]
ProteinModelPortalF1SVL0.
SMRF1SVL0. Positions 3-519.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAM02649; AAM02649; MK1436.
GeneID1478031.
KEGGmka:MK1436.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR010994. RuvA_2-like.
IPR024065. TopoV_catalytic_domain.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
SMARTSM00278. HhH1. 11 hits.
[Graphical view]
SUPFAMSSF140979. SSF140979. 2 hits.
SSF47781. SSF47781. 6 hits.
ProtoNetSearch...

Other

EvolutionaryTraceF1SVL0.

Entry information

Entry nameF1SVL0_METKA
AccessionPrimary (citable) accession number: F1SVL0
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: June 11, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)