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F1SQU9 (F1SQU9_PIG) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:LOC100156438 Ensembl ENSSSCP00000012913
OrganismSus scrofa (Pig) [Reference proteome] Ensembl ENSSSCP00000012913
Taxonomic identifier9823 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

Protein attributes

Sequence length860 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSSSCP00000012913

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentFanconi anaemia nuclear complex

Inferred from electronic annotation. Source: Compara

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F1SQU9 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: DE4D48301730DBB1

FASTA86097,737
        10         20         30         40         50         60 
MSSNEQERLL CYNGEVLVFC LSKGNFVDKG PAKITMIHVR RMTFDRGTGV FVQKSTGSFS 

        70         80         90        100        110        120 
IKEEYSHLKI MCCNSVSDFR TGINLPYVMI QCNKENNIFR YFLLFLHSTN KFEKRLSFRL 

       130        140        150        160        170        180 
GYELKDSIRV LNGPLVLWRH VQTFFYISSQ TGRVVTVSFN FSSIDWVGEI ENLGIVLLGL 

       190        200        210        220        230        240 
KRYYLSEEGC TPKPSKSDYA TWNTPFCVYS LEREEVLSDT YLIPPVYSSV VTCVHVCATE 

       250        260        270        280        290        300 
IVDNQLRLSL IALTQKNQLI SFQNGTPKSV CQLPFEDPCA VHLMDSGGGN LHFIVSFRSN 

       310        320        330        340        350        360 
DACAVRAKNF QVVDKWEKMS SILVDDFLGT GTEQVLLLFK DSLSSDCLSS FKITNLDNIN 

       370        380        390        400        410        420 
YSSQPVDCSQ DDLFDNEQDN CSLMIPPLER RLKVGFVSIQ ELQQNLLLKE KILSKSYKAF 

       430        440        450        460        470        480 
TNLFQGKDDS TPSAKEVKLI MDYLVTLCGK EENPVCTSDE KLSENFQDSK QLVEKIWYRV 

       490        500        510        520        530        540 
IEDSLVVGVK TTSSLKVSLS HVTLSLSMHR ACNSSFPGIK CQNRVLQLNR NSSPPPCLVP 

       550        560        570        580        590        600 
YEVRSEVKRI KLSVDSEQEE EKKESLVCEQ PSEKDCVQMI TAVTSLSPLL AFSNFCCIVL 

       610        620        630        640        650        660 
LQIRERENAN YSKVHYVHCG RIFLSLEDLS SGKYLLTFPK KKPLEHMEDL FALLAVLHRA 

       670        680        690        700        710        720 
CFQITSRSYA LTSVKSWLLE HMECEVIKEF PEVCFCKRPG NFYGTFFSWK ERTPFEGILI 

       730        740        750        760        770        780 
VYFRNQTVLF QCLHNLSRVL PVNSFFKNLK LGSEDILIDH LTLALEKELV TLGSLSSASA 

       790        800        810        820        830        840 
KVESNLVQSS EASEEKSSNV AASSDREERI HLYREELQRE KQQTLGTNLN VSGALYREMT 

       850        860 
LKLAEVQLKS DLAAQKLTDL 

« Hide

References

« Hide 'large scale' references
[1]Porcine genome sequencing project
Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (MAY-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU207369 Genomic DNA. No translation available.
CU487221 Genomic DNA. No translation available.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSSSCT00000013269; ENSSSCP00000012913; ENSSSCG00000012130.

Phylogenomic databases

GeneTreeENSGT00390000009885.
OMAKQRTPFE.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameF1SQU9_PIG
AccessionPrimary (citable) accession number: F1SQU9
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: March 6, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)