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F1SM45 (F1SM45_PIG) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:LOC100738467 Ensembl ENSSSCP00000017266
OrganismSus scrofa (Pig) [Reference proteome] Ensembl ENSSSCP00000017266
Taxonomic identifier9823 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSSSCP00000017266

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processmetabolic process

Inferred from electronic annotation. Source: GOC

   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F1SM45 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 336E802820DCF5A3

FASTA37941,881
        10         20         30         40         50         60 
MASCPVLHKE TVFQTGAHAY RIPALLYLPQ QKTLLAFAEK RASKKDEHAK LIVLRRGSYD 

        70         80         90        100        110        120 
ASTRQVRWHP QEAVAQAQLE GHRSMNPSPL YDKKTGTLFL FFIAIPGQVS EHHQLQTRVN 

       130        140        150        160        170        180 
LTRLCQVTST DHGRSWSPAR DLTDSVIGPA HKDWATFAVG PGHCLQLHNQ TQSLLVPAYA 

       190        200        210        220        230        240 
YRNLPFPRAP APSAFCLVSH DHGHTWARGS FVALDTLECQ VAEVGDAEQR VVYLNARSRL 

       250        260        270        280        290        300 
QARVQAQSTN GGLDFGETQP VKQLVEPPHG CQGSIISFPS PRGGPDSPHQ WLLYTHPTDP 

       310        320        330        340        350        360 
KRRSNLGVYL NRQAPAPLAW SEPALLATGS CAYSDLQSMG AGPDGSPQFG CLYESNDYEE 

       370 
IVFVMFTLKQ AFPAAFLLQ 

« Hide

References

« Hide 'large scale' references
[1]Porcine genome sequencing project
Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (MAY-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU928130 Genomic DNA. No translation available.
RefSeqXP_003483814.1. XM_003483766.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSSSCT00000017747; ENSSSCP00000017266; ENSSSCG00000016297.
GeneID100738467.
KEGGssc:100738467.

Organism-specific databases

CTD4759.

Phylogenomic databases

GeneTreeENSGT00390000011171.
KOK12357.
OMAQSMGTGP.
OrthoDBEOG7MSMNP.
TreeFamTF331063.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026945. Sialidase-2.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF6. PTHR10628:SF6. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameF1SM45_PIG
AccessionPrimary (citable) accession number: F1SM45
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: February 19, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)