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Protein
Submitted name:

Pumilio RNA binding family member 3

Gene

PUM3

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Pumilio RNA binding family member 3Imported
Gene namesi
Name:PUM3Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1SJG9.
PeptideAtlasiF1SJG9.

Expressioni

Gene expression databases

BgeeiENSSSCG00000005227.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000005619.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini137 – 490PUM-HDInterPro annotationAdd BLAST354
Repeati164 – 200PumilioPROSITE-ProRule annotationAdd BLAST37
Repeati201 – 236PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati350 – 385PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati424 – 460PumilioPROSITE-ProRule annotationAdd BLAST37

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiKOG2050. Eukaryota.
ENOG410XSHY. LUCA.
GeneTreeiENSGT00390000015757.
InParanoidiF1SJG9.
OMAiREWYGPE.
OrthoDBiEOG091G06QP.
TreeFamiTF312954.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiView protein in InterPro
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR012959. CPL_dom.
IPR033133. PUM-HD.
IPR001313. Pumilio_RNA-bd_rpt.
PfamiView protein in Pfam
PF08144. CPL. 1 hit.
SMARTiView protein in SMART
SM00025. Pumilio. 6 hits.
SUPFAMiSSF48371. SSF48371. 2 hits.
PROSITEiView protein in PROSITE
PS50302. PUM. 4 hits.
PS50303. PUM_HD. 1 hit.

Sequencei

Sequence statusi: Complete.

F1SJG9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMEVKGKKKF TGKGTKTSQE KNRFHKNNGS GSSKTFPQKV VKEGEPKITS
60 70 80 90 100
KNFEKSATKP GKKGVKQFKN KQQGDKIPKN KFQQGNKFNR KRKIQPDSKN
110 120 130 140 150
DGSAAKKPKW DEFKKKKKEL KQSRQLSDKA NYDIVVRAKQ IWEILRRKDC
160 170 180 190 200
NKEKRVKLMS DLQKLIQGKI KTIAFAHDST RVIQCYIQYG TEEQRKQAFE
210 220 230 240 250
ELRGDLVELS KAKYSRNIVK KFLMYGNKAQ IAEIMRSFKG HVRKMLRHAE
260 270 280 290 300
ASAIVEYAYN DKAILEQRNM LTEELYGNTF QLYKSADCPT LDKVLEVQPE
310 320 330 340 350
KLELIMDEMK QILTPMAQKE AVIKHSLVHK VFLDFFTHAP PKLRSEMIEA
360 370 380 390 400
IREAVIYLAH THDGARVAMH CLWHGTPKDR KVIVKTMKTY VEKVANGQYS
410 420 430 440 450
HLVLLAAFDC IDDTKLVKQI IISEIINSLP NIVNDKYGRK VLLYLLSPRD
460 470 480 490 500
PAHTVREIIE VLQKGDGNAH SKKDTEIRRR ELLESISPAL LSYLQGHAQE
510 520 530 540 550
VMLDKSACVL VSDILGAAIG DVQPAMNAIA SLAAAELHPG GKDGELHIAE
560 570 580 590 600
HPAGHLVLKW LIEQDKKMKE SGREGCFAKT LVEHVGMKNL KSWASVNRGA
610 620 630 640
IILSSLLQSS DQEVANEVKA GLKSLIPTLE KNKNTSKGIE MLLEKLTA
Length:648
Mass (Da):73,408
Last modified:November 22, 2017 - v3
Checksum:i88FD55F84148F7DE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000005 Genomic DNA. No translation available.
RefSeqiXP_001927704.4. XM_001927669.6.
UniGeneiSsc.97852.

Genome annotation databases

EnsembliENSSSCT00000005761; ENSSSCP00000005619; ENSSSCG00000005227.
GeneIDi100152831.

Similar proteinsi

Entry informationi

Entry nameiF1SJG9_PIG
AccessioniPrimary (citable) accession number: F1SJG9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 22, 2017
Last modified: January 31, 2018
This is version 44 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported