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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei7 – 27HelicalSequence analysisAdd BLAST21
Transmembranei33 – 56HelicalSequence analysisAdd BLAST24
Transmembranei77 – 103HelicalSequence analysisAdd BLAST27
Transmembranei115 – 133HelicalSequence analysisAdd BLAST19
Transmembranei145 – 163HelicalSequence analysisAdd BLAST19
Transmembranei196 – 217HelicalSequence analysisAdd BLAST22
Transmembranei272 – 292HelicalSequence analysisAdd BLAST21
Transmembranei312 – 331HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF1SF57.
PeptideAtlasiF1SF57.

Expressioni

Gene expression databases

BgeeiENSSSCG00000004237.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000004575.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2592. Eukaryota.
ENOG410XP7K. LUCA.
GeneTreeiENSGT00550000074522.
InParanoidiF1SF57.
OMAiSSSWICI.
OrthoDBiEOG091G07WS.
TreeFamiTF312881.

Family and domain databases

InterProiIPR029552. SERINC1.
IPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PTHR10383:SF15. PTHR10383:SF15. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F1SF57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIYFCFRFW FFKFAVAIAI IIGAFFIPEG TFTTVWFYVG MAGAFCFILI
60 70 80 90 100
QLVLLIDFAH SWNESWVEKM EEGNSRCWYA ALLSATALNY LLSLVAVVLF
110 120 130 140 150
FVYYTHPASC AENKAFISVN MLLCFGASIM SILPKIQESQ PRSGLLQSSV
160 170 180 190 200
ITVYTMYLTW SAMTNEPETD CNPSLLSIIG YNTTSTIPKK GESVQWWHAQ
210 220 230 240 250
GIIGLILFLL CVFYSSIRTS NNSQVNKLTL TSDESTLIED GGARSDGSLE
260 270 280 290 300
DGDDVHRAID NERDGVTYSY SFFHFMLFLA SLYIMMTLTN WYRYEPSREM
310 320 330
KSQWTAVWVK ISSSWIGIVL YVWTLVAPLV LTNRDFD
Length:337
Mass (Da):38,406
Last modified:July 11, 2012 - v2
Checksum:i7D9295BFEB3A2E0C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU972418 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSSSCT00000004682; ENSSSCP00000004575; ENSSSCG00000004237.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU972418 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000004575.

Proteomic databases

PaxDbiF1SF57.
PeptideAtlasiF1SF57.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000004682; ENSSSCP00000004575; ENSSSCG00000004237.

Phylogenomic databases

eggNOGiKOG2592. Eukaryota.
ENOG410XP7K. LUCA.
GeneTreeiENSGT00550000074522.
InParanoidiF1SF57.
OMAiSSSWICI.
OrthoDBiEOG091G07WS.
TreeFamiTF312881.

Gene expression databases

BgeeiENSSSCG00000004237.

Family and domain databases

InterProiIPR029552. SERINC1.
IPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PTHR10383:SF15. PTHR10383:SF15. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiF1SF57_PIG
AccessioniPrimary (citable) accession number: F1SF57
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: July 11, 2012
Last modified: November 30, 2016
This is version 33 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.