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Protein
Submitted name:

Serine incorporator 1

Gene

SERINC1

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Serine incorporator 1Imported
Gene namesi
Name:SERINC1Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei7 – 27HelicalSequence analysisAdd BLAST21
Transmembranei33 – 56HelicalSequence analysisAdd BLAST24
Transmembranei77 – 103HelicalSequence analysisAdd BLAST27
Transmembranei115 – 133HelicalSequence analysisAdd BLAST19
Transmembranei145 – 163HelicalSequence analysisAdd BLAST19
Transmembranei196 – 217HelicalSequence analysisAdd BLAST22
Transmembranei272 – 292HelicalSequence analysisAdd BLAST21
Transmembranei312 – 331HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF1SF57.
PeptideAtlasiF1SF57.

Expressioni

Gene expression databases

BgeeiENSSSCG00000004237.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000004575.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2592. Eukaryota.
ENOG410XP7K. LUCA.
GeneTreeiENSGT00550000074522.
InParanoidiF1SF57.
OMAiVCFGMAM.
OrthoDBiEOG091G07WS.
TreeFamiTF312881.

Family and domain databases

InterProiView protein in InterPro
IPR029552. SERINC1.
IPR005016. TDE1/TMS.
PANTHERiPTHR10383. PTHR10383. 1 hit.
PTHR10383:SF34. PTHR10383:SF34. 1 hit.
PfamiView protein in Pfam
PF03348. Serinc. 1 hit.

Sequencei

Sequence statusi: Complete.

F1SF57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIYFCFRFW FFKFAVAIAI IIGAFFIPEG TFTTVWFYVG MAGAFCFILI
60 70 80 90 100
QLVLLIDFAH SWNESWVEKM EEGNSRCWYA ALLSATALNY LLSLVAVVLF
110 120 130 140 150
FVYYTHPASC AENKAFISVN MLLCFGASIM SILPKIQESQ PRSGLLQSSV
160 170 180 190 200
ITVYTMYLTW SAMTNEPETD CNPSLLSIIG YNTTSTIPKK GESVQWWHAQ
210 220 230 240 250
GIIGLILFLL CVFYSSIRTS NNSQVNKLTL TSDESTLIED GGARSDGSLE
260 270 280 290 300
DGDDVHRAID NERDGVTYSY SFFHFMLFLA SLYIMMTLTN WYRYEPSREM
310 320 330
KSQWTAVWVK ISSSWIGIVL YVWTLVAPLV LTNRDFD
Length:337
Mass (Da):38,406
Last modified:July 11, 2012 - v2
Checksum:i7D9295BFEB3A2E0C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU972418 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSSSCT00000004682; ENSSSCP00000004575; ENSSSCG00000004237.

Similar proteinsi

Entry informationi

Entry nameiF1SF57_PIG
AccessioniPrimary (citable) accession number: F1SF57
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: July 11, 2012
Last modified: September 27, 2017
This is version 39 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported