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Protein
Submitted name:

Serine incorporator 1

Gene

SERINC1

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-SSC-977347 Serine biosynthesis

Names & Taxonomyi

Protein namesi
Submitted name:
Serine incorporator 1Imported
Gene namesi
Name:SERINC1Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei40 – 61HelicalSequence analysisAdd BLAST22
Transmembranei89 – 109HelicalSequence analysisAdd BLAST21
Transmembranei121 – 143HelicalSequence analysisAdd BLAST23
Transmembranei149 – 172HelicalSequence analysisAdd BLAST24
Transmembranei193 – 219HelicalSequence analysisAdd BLAST27
Transmembranei231 – 249HelicalSequence analysisAdd BLAST19
Transmembranei312 – 333HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_501251971720 – 395Sequence analysisAdd BLAST376

Proteomic databases

PaxDbiF1SF57
PeptideAtlasiF1SF57

Expressioni

Gene expression databases

BgeeiENSSSCG00000004237

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000004575

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2592 Eukaryota
ENOG410XP7K LUCA
GeneTreeiENSGT00550000074522
InParanoidiF1SF57
OrthoDBiEOG091G07WS
TreeFamiTF312881

Family and domain databases

InterProiView protein in InterPro
IPR029552 SERINC1
IPR005016 TDE1/TMS
PANTHERiPTHR10383 PTHR10383, 1 hit
PTHR10383:SF15 PTHR10383:SF15, 1 hit
PfamiView protein in Pfam
PF03348 Serinc, 1 hit

Sequencei

Sequence statusi: Complete.

F1SF57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSVLGLCSM ASWIPCLCGS APCLLCRCCP SGNNSTVTRL IYALFLLVGV
60 70 80 90 100
CVACVMLIPG MEEQLNKIPG FCENEKGVVP CNILVGYKAV YRLCFGLAMF
110 120 130 140 150
HLLLSLLMIK VKSSSDPRAA VHNGFWFFKF AVAIAIIIGA FFIPEGTFTT
160 170 180 190 200
VWFYVGMAGA FCFILIQLVL LIDFAHSWNE SWVEKMEEGN SRCWYAALLS
210 220 230 240 250
ATALNYLLSL VAVVLFFVYY THPASCAENK AFISVNMLLC FGASIMSILP
260 270 280 290 300
KIQESQPRSG LLQSSVITVY TMYLTWSAMT NEPETDCNPS LLSIIGYNTT
310 320 330 340 350
STIPKKGESV QWWHAQGIIG LILFLLCVFY SSIRTSNNSQ VNKLTLTSDE
360 370 380 390
STLIEDGGAR SDGSLEDGDD VHRAIDNERD GVTLYHDDPY QLVQV
Length:395
Mass (Da):43,533
Last modified:November 22, 2017 - v3
Checksum:i0A51D7CCD2C70023
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000001 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSSSCT00000004682; ENSSSCP00000004575; ENSSSCG00000004237

Similar proteinsi

Entry informationi

Entry nameiF1SF57_PIG
AccessioniPrimary (citable) accession number: F1SF57
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 22, 2017
Last modified: March 28, 2018
This is version 45 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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