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F1SER2 (F1SER2_PIG) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:SFTPA1 Ensembl ENSSSCP00000011023
OrganismSus scrofa (Pig) [Reference proteome] Ensembl ENSSSCP00000011023
Taxonomic identifier9823 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

Protein attributes

Sequence length247 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains C-type lectin domain. SAAS SAAS018378

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSSSCP00000011023

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F1SER2 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 3E4A5ED2DD57F0AC

FASTA24726,417
        10         20         30         40         50         60 
MLRWPLALTF LLLAVSGLEC DVKEVCLASP GIPGTPGSHG LPGRDGRDGI KGDPGPPGPM 

        70         80         90        100        110        120 
GPPGGMAGPP GQDGMIGAPG LPGERGEKGE PGERGPPGLP AHLDEELQSA LHEIRHQILQ 

       130        140        150        160        170        180 
SMGVLSFQEF MLAVGEKVFS TNGQSVAFMS LESCVPEQGR IAAPRSPEEN EAIASIVKKH 

       190        200        210        220        230        240 
NTYAYLGLVE GPTAGDFFYL DGTPVNYTNW YPGEPRGRGK EKCVEMYTDG QWNDRNCQQY 


RLAICEF 

« Hide

References

« Hide 'large scale' references
[1]Porcine genome sequencing project
Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU469045 Genomic DNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSSSCT00000011315; ENSSSCP00000011023; ENSSSCG00000010336.

Phylogenomic databases

GeneTreeENSGT00700000104102.

Family and domain databases

Gene3D3.10.100.10. 1 hit.
InterProIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
IPR008160. Collagen.
[Graphical view]
PfamPF01391. Collagen. 1 hit.
PF00059. Lectin_C. 1 hit.
[Graphical view]
SMARTSM00034. CLECT. 1 hit.
[Graphical view]
SUPFAMSSF56436. SSF56436. 1 hit.
PROSITEPS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1SER2_PIG
AccessionPrimary (citable) accession number: F1SER2
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: July 9, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)