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F1SDX6

- F1SDX6_PIG

UniProt

F1SDX6 - F1SDX6_PIG

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Protein
Submitted name:

Uncharacterized protein

Gene
TGM2
Organism
Sus scrofa (Pig)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Binds 1 calcium ion per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei277 – 2771 By similarity
Active sitei335 – 3351 By similarityUniRule annotation
Active sitei358 – 3581 By similarity
Metal bindingi398 – 3981Calcium By similarityUniRule annotation
Metal bindingi400 – 4001Calcium By similarityUniRule annotation
Metal bindingi447 – 4471Calcium By similarityUniRule annotation
Metal bindingi452 – 4521Calcium By similarityUniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein-glutamine gamma-glutamyltransferase activity Source: Ensembl

GO - Biological processi

  1. apoptotic cell clearance Source: Ensembl
  2. branching involved in salivary gland morphogenesis Source: Ensembl
  3. peptide cross-linking Source: InterPro
  4. positive regulation of cell adhesion Source: Ensembl
  5. salivary gland cavitation Source: Ensembl
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:TGM2Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
ProteomesiUP000008227: Chromosome 17

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00740000115156.
KOiK05625.
OMAiANGRDHH.
OrthoDBiEOG7WT40M.
TreeFamiTF324278.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F1SDX6-1 [UniParc]FASTAAdd to Basket

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MAEDLILERC DLELEANGRD HHTADLCRER LVVRRGQAFR LTLHFEGRNY    50
EPSVDRLTFS AVTGPAPSEE AGTKARFRLS DAAEEGAWRA EVVDQQDNTL 100
SLQLSTPASA PIGLYRLNLE ASTGYEGSSF LLGHFTLLFN AWCPADDVYL 150
DSDEERQEYV LTQQGFVYQG SAKFIKSIPW NFGQFEDGIL DSCLMLLDVN 200
PKFMRDAGRD CSRRSSPVYV GRVVSGMVNC NDDQGVLLGR WDNNYGDGVS 250
PMFWIGSVDI LRRWKNHGCQ RVKYGQCWVF AAVACTVLRC LGIPTRVVTN 300
YNSAHDQNSN LLIEYFRNEF GEIQSDKSEM IWNFHCWVES WMTRPDLQPG 350
YEGWQALDPT PQEKSEGTYC CGPVPVRAIK EGDLSTKYDA PFVFAEVNAD 400
VVDWIRRDDG SVYKSINRSL VVGLKISTKS VGRDEREDIT HTYKYPEGSP 450
EEREAFTKAN HLNKLADKEE SEVAMRIRVG EGMNMGSDFD VFAHITNNTA 500
EEHTGRLLLC ARTVSYNGVL GPECGTKDLL NFSLEPYSEK SVPLRILYEK 550
YCDCLTESNL IKVRGLLIEP AANSYLLAER DIYLENPEIK IRILGEPKQN 600
RKLVAEVSLR NPLTTPLSGC IFTVEGAGLT EEQKTVEIPD PVGAGEEVKV 650
RVDLLPLLVG RHKLVVNFNS NRLKAVKGFR NVIVGPS 687
Length:687
Mass (Da):77,224
Last modified:May 3, 2011 - v1
Checksum:iBC3D1B64300930BE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU467005 Genomic DNA. No translation available.
RefSeqiXP_003360037.2. XM_003359989.3.
UniGeneiSsc.84061.
Ssc.98088.

Genome annotation databases

EnsembliENSSSCT00000031001; ENSSSCP00000022472; ENSSSCG00000023522.
GeneIDi100154530.
KEGGissc:100154530.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU467005 Genomic DNA. No translation available.
RefSeqi XP_003360037.2. XM_003359989.3.
UniGenei Ssc.84061.
Ssc.98088.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSSSCT00000031001 ; ENSSSCP00000022472 ; ENSSSCG00000023522 .
GeneIDi 100154530.
KEGGi ssc:100154530.

Phylogenomic databases

GeneTreei ENSGT00740000115156.
KOi K05625.
OMAi ANGRDHH.
OrthoDBi EOG7WT40M.
TreeFami TF324278.

Family and domain databases

Gene3Di 2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view ]
PANTHERi PTHR11590. PTHR11590. 1 hit.
Pfami PF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
SMARTi SM00460. TGc. 1 hit.
[Graphical view ]
SUPFAMi SSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Porcine genome sequencing project
    Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (NOV-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiF1SDX6_PIG
AccessioniPrimary (citable) accession number: F1SDX6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: July 9, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi