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F1SDX6

- F1SDX6_PIG

UniProt

F1SDX6 - F1SDX6_PIG

Protein
Submitted name:

Uncharacterized protein

Gene

TGM2

Organism
Sus scrofa (Pig)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 calcium ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei277 – 2771UniRule annotation
    Active sitei277 – 2771 By similarity
    Active sitei335 – 3351UniRule annotation
    Active sitei358 – 3581UniRule annotation
    Active sitei358 – 3581 By similarity
    Metal bindingi398 – 3981CalciumUniRule annotation
    Metal bindingi400 – 4001CalciumUniRule annotation
    Metal bindingi447 – 4471CalciumUniRule annotation
    Metal bindingi452 – 4521CalciumUniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein-glutamine gamma-glutamyltransferase activity Source: Ensembl

    GO - Biological processi

    1. apoptotic cell clearance Source: Ensembl
    2. branching involved in salivary gland morphogenesis Source: Ensembl
    3. peptide cross-linking Source: InterPro
    4. positive regulation of cell adhesion Source: Ensembl
    5. salivary gland cavitation Source: Ensembl

    Keywords - Ligandi

    CalciumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:TGM2Imported
    OrganismiSus scrofa (Pig)Imported
    Taxonomic identifieri9823 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
    ProteomesiUP000008227: Chromosome 17

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00740000115156.
    KOiK05625.
    OMAiANGRDHH.
    OrthoDBiEOG7WT40M.
    TreeFamiTF324278.

    Family and domain databases

    Gene3Di2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view]
    PANTHERiPTHR11590. PTHR11590. 1 hit.
    PfamiPF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
    SMARTiSM00460. TGc. 1 hit.
    [Graphical view]
    SUPFAMiSSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F1SDX6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAEDLILERC DLELEANGRD HHTADLCRER LVVRRGQAFR LTLHFEGRNY    50
    EPSVDRLTFS AVTGPAPSEE AGTKARFRLS DAAEEGAWRA EVVDQQDNTL 100
    SLQLSTPASA PIGLYRLNLE ASTGYEGSSF LLGHFTLLFN AWCPADDVYL 150
    DSDEERQEYV LTQQGFVYQG SAKFIKSIPW NFGQFEDGIL DSCLMLLDVN 200
    PKFMRDAGRD CSRRSSPVYV GRVVSGMVNC NDDQGVLLGR WDNNYGDGVS 250
    PMFWIGSVDI LRRWKNHGCQ RVKYGQCWVF AAVACTVLRC LGIPTRVVTN 300
    YNSAHDQNSN LLIEYFRNEF GEIQSDKSEM IWNFHCWVES WMTRPDLQPG 350
    YEGWQALDPT PQEKSEGTYC CGPVPVRAIK EGDLSTKYDA PFVFAEVNAD 400
    VVDWIRRDDG SVYKSINRSL VVGLKISTKS VGRDEREDIT HTYKYPEGSP 450
    EEREAFTKAN HLNKLADKEE SEVAMRIRVG EGMNMGSDFD VFAHITNNTA 500
    EEHTGRLLLC ARTVSYNGVL GPECGTKDLL NFSLEPYSEK SVPLRILYEK 550
    YCDCLTESNL IKVRGLLIEP AANSYLLAER DIYLENPEIK IRILGEPKQN 600
    RKLVAEVSLR NPLTTPLSGC IFTVEGAGLT EEQKTVEIPD PVGAGEEVKV 650
    RVDLLPLLVG RHKLVVNFNS NRLKAVKGFR NVIVGPS 687
    Length:687
    Mass (Da):77,224
    Last modified:May 3, 2011 - v1
    Checksum:iBC3D1B64300930BE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU467005 Genomic DNA. No translation available.
    RefSeqiXP_003360037.2. XM_003359989.3.
    UniGeneiSsc.84061.
    Ssc.98088.

    Genome annotation databases

    EnsembliENSSSCT00000031001; ENSSSCP00000022472; ENSSSCG00000023522.
    GeneIDi100154530.
    KEGGissc:100154530.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU467005 Genomic DNA. No translation available.
    RefSeqi XP_003360037.2. XM_003359989.3.
    UniGenei Ssc.84061.
    Ssc.98088.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSSSCT00000031001 ; ENSSSCP00000022472 ; ENSSSCG00000023522 .
    GeneIDi 100154530.
    KEGGi ssc:100154530.

    Phylogenomic databases

    GeneTreei ENSGT00740000115156.
    KOi K05625.
    OMAi ANGRDHH.
    OrthoDBi EOG7WT40M.
    TreeFami TF324278.

    Family and domain databases

    Gene3Di 2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view ]
    PANTHERi PTHR11590. PTHR11590. 1 hit.
    Pfami PF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
    SMARTi SM00460. TGc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Porcine genome sequencing project
      Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (NOV-2012) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiF1SDX6_PIG
    AccessioniPrimary (citable) accession number: F1SDX6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3