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Protein
Submitted name:

MYCN proto-oncogene, bHLH transcription factor

Gene

MYCN

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
MYCN proto-oncogene, bHLH transcription factorImported
Gene namesi
Name:MYCNImported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1SCS2.

Expressioni

Gene expression databases

BgeeiENSSSCG00000008618.
GenevisibleiF1SCS2. SS.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000009187.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini382 – 434BHLHInterPro annotationAdd BLAST53

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili431 – 458Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IJ8V. Eukaryota.
ENOG41105VW. LUCA.
GeneTreeiENSGT00510000046414.
InParanoidiF1SCS2.
KOiK09109.
OMAiFAEHSSE.
OrthoDBiEOG091G0ZJQ.
TreeFamiTF106001.

Family and domain databases

CDDicd00083. HLH. 1 hit.
Gene3Di4.10.280.10. 1 hit.
InterProiView protein in InterPro
IPR011598. bHLH_dom.
IPR002418. Tscrpt_reg_Myc.
IPR012682. Tscrpt_reg_Myc_N.
PfamiView protein in Pfam
PF00010. HLH. 1 hit.
PF01056. Myc_N. 1 hit.
PIRSFiPIRSF001705. Myc_protein. 1 hit.
PRINTSiPR00044. LEUZIPPRMYC.
SMARTiView protein in SMART
SM00353. HLH. 1 hit.
SUPFAMiSSF47459. SSF47459. 1 hit.
PROSITEiView protein in PROSITE
PS50888. BHLH. 1 hit.

Sequencei

Sequence statusi: Complete.

F1SCS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSCTASTMP GMICKNPDLE FDSLQPCFYP DEDDFYFGGP DSTPPGEDIW
60 70 80 90 100
KKFELLPTPP LSPSRAFPEH SPEPPNWATE MLLPEADLWG NPAEEDAFGL
110 120 130 140 150
GGLGGLTPNP VILQDCMWSG FSAREKLERA VSEKLQHGRP PAAGPAAPVP
160 170 180 190 200
GAGATSPGGR GHSAAAAGPG RAGAALPTEL AHPAAECVDP AVVFPFPVNK
210 220 230 240 250
REPAPAPAAP AVAPAAGTVI VSGASAAAPA GAPVAALPRP GGRPASGSDH
260 270 280 290 300
KALSTSGEDT LSDSDDEDDE EEDEEEEIDV VTVEKRRSSS NSKAVTTFTI
310 320 330 340 350
TVRPKSAALG PGRAPAGELI LKRCVPIHQQ HNYAAPSPYV ESEDAPPQKK
360 370 380 390 400
MKSETSPRPL KSVVPPKAKS LSPRNSDSED SERRRNHNIL ERQRRNDLRS
410 420 430 440 450
SFLTLRDHVP ELVKNEKAAK VVILKKATEY VHSLQAEEHQ LLLEKEKLQA
460
RQQQLLKKIE HARTC
Length:465
Mass (Da):49,670
Last modified:May 3, 2011 - v1
Checksum:iCBEFE70BFE892526
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU467074 Genomic DNA. No translation available.
RefSeqiXP_003125394.1. XM_003125346.3.

Genome annotation databases

EnsembliENSSSCT00000009429; ENSSSCP00000009187; ENSSSCG00000008618.
GeneIDi100518190.
KEGGissc:100518190.

Similar proteinsi

Entry informationi

Entry nameiF1SCS2_PIG
AccessioniPrimary (citable) accession number: F1SCS2
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: September 27, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported