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Protein
Submitted name:

Uncharacterized protein

Gene

DPAGT1

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-SSC-446193. Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:DPAGT1Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 9

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3827HelicalSequence analysisAdd
BLAST
Transmembranei59 – 7921HelicalSequence analysisAdd
BLAST
Transmembranei95 – 11420HelicalSequence analysisAdd
BLAST
Transmembranei126 – 14722HelicalSequence analysisAdd
BLAST
Transmembranei167 – 18822HelicalSequence analysisAdd
BLAST
Transmembranei195 – 21117HelicalSequence analysisAdd
BLAST
Transmembranei223 – 24119HelicalSequence analysisAdd
BLAST
Transmembranei253 – 27119HelicalSequence analysisAdd
BLAST
Transmembranei277 – 29721HelicalSequence analysisAdd
BLAST
Transmembranei379 – 40123HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF1SAH5.

Expressioni

Gene expression databases

GenevisibleiF1SAH5. SS.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000016033.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2788. Eukaryota.
COG0472. LUCA.
GeneTreeiENSGT00390000011424.
InParanoidiF1SAH5.
KOiK01001.
OMAiWAFPELP.
OrthoDBiEOG73804W.
TreeFamiTF313734.

Family and domain databases

InterProiIPR000715. Glycosyl_transferase_4.
[Graphical view]
PfamiPF00953. Glycos_transf_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F1SAH5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWAFPELPMP LLVNLIGSLL GFVATLTLIP AFRGHFIAAR LCGQDLNKSN
60 70 80 90 100
RQQIPESQGV ISGAVFLIIL FCFIPFPFLN CFVEEHCKAF PHHEFVALIG
110 120 130 140 150
ALLAICCMIF LGFADDVLNL RWRHKLLLPT AASLPLLMVY FTNFGNTTIV
160 170 180 190 200
VPKPFRPILG LHLDLGILYY VYMGLLAVFC TNAINILAGI NGLEAGQSLV
210 220 230 240 250
ISASIIVFNL VELEGDYRDD HVFSLYFMIP FFFTTLGLLY HNWYPSRVFV
260 270 280 290 300
GDTFCYFAGM TFAVVGILGH FSKTMLLFFM PQVFNFLYSL PQLLHIIPCP
310 320 330 340 350
RHRMPRLNTK TGKLEMSYSK FKTKSLSFLG TFILKVAESL RLVTVRQSEN
360 370 380 390 400
EDGAFTECNN MTLINLLLKV FGPMHERNLT LFLLLLQVVG SAVTFSIRYQ

LVRLFYDV
Length:408
Mass (Da):46,193
Last modified:May 3, 2011 - v1
Checksum:iEC87B8BD6B1DB71F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU639481 Genomic DNA. No translation available.
RefSeqiXP_003129975.1. XM_003129927.3.
UniGeneiSsc.5477.

Genome annotation databases

EnsembliENSSSCT00000016476; ENSSSCP00000016033; ENSSSCG00000015110.
GeneIDi100517773.
KEGGissc:100517773.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU639481 Genomic DNA. No translation available.
RefSeqiXP_003129975.1. XM_003129927.3.
UniGeneiSsc.5477.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000016033.

Proteomic databases

PaxDbiF1SAH5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000016476; ENSSSCP00000016033; ENSSSCG00000015110.
GeneIDi100517773.
KEGGissc:100517773.

Organism-specific databases

CTDi1798.

Phylogenomic databases

eggNOGiKOG2788. Eukaryota.
COG0472. LUCA.
GeneTreeiENSGT00390000011424.
InParanoidiF1SAH5.
KOiK01001.
OMAiWAFPELP.
OrthoDBiEOG73804W.
TreeFamiTF313734.

Enzyme and pathway databases

ReactomeiR-SSC-446193. Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein.

Gene expression databases

GenevisibleiF1SAH5. SS.

Family and domain databases

InterProiIPR000715. Glycosyl_transferase_4.
[Graphical view]
PfamiPF00953. Glycos_transf_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Porcine genome sequencing project
    Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiF1SAH5_PIG
AccessioniPrimary (citable) accession number: F1SAH5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: March 16, 2016
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.