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Protein
Submitted name:

Uncharacterized protein

Gene

TMED10

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  1. beta-amyloid formation Source: Ensembl
  2. COPI-coated vesicle budding Source: Ensembl
  3. Golgi organization Source: Ensembl
  4. intracellular protein transport Source: Ensembl
  5. regulated secretory pathway Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:TMED10Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
ProteomesiUP000008227: Chromosome 7

Subcellular locationi

Membrane UniRule annotation; Single-pass type I membrane protein UniRule annotation

GO - Cellular componenti

  1. endoplasmic reticulum Source: Ensembl
  2. endoplasmic reticulum-Golgi intermediate compartment Source: Ensembl
  3. extracellular vesicular exosome Source: Ensembl
  4. gamma-secretase complex Source: Ensembl
  5. Golgi membrane Source: Ensembl
  6. integral component of membrane Source: UniProtKB-KW
  7. secretory granule membrane Source: Ensembl
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Sequence similaritiesi

Belongs to the EMP24/GP25L family.UniRule annotation
Contains 1 GOLD domain.UniRule annotation
Contains GOLD domain.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00550000074954.
InParanoidiF1S2Q3.
OMAiVCFESKS.
OrthoDBiEOG7PZRZM.
TreeFamiTF313729.

Family and domain databases

InterProiIPR009038. GOLD.
IPR015720. TMP21-related.
[Graphical view]
PANTHERiPTHR22811. PTHR22811. 1 hit.
PfamiPF01105. EMP24_GP25L. 1 hit.
[Graphical view]
PROSITEiPS50866. GOLD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F1S2Q3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSGLSDPQAL RGPCPLALLL LFLLGPSSVL TISFHLPVNS RKCLREEIHK
60 70 80 90 100
DLLVTGAYEI TDQSGGAGGP RTHLKITDSA GHILYSKEDA TKGKFAFTTE
110 120 130 140 150
DYDMFEVCFE SKGTGRIPDQ LVILDMKHGV EAKNYEEIAK VEKLKPLEVE
160 170 180 190 200
LRRLEDLSES IVNDFAYMKK REEEMRDTNE STNTRVLYFS IFSMFCLIGL
210
ATWQVFYLRR FFKAKKLIE
Length:219
Mass (Da):24,911
Last modified:July 11, 2012 - v2
Checksum:iD47F4CD9B6E3C773
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT737372 Genomic DNA. No translation available.
RefSeqiXP_001926746.1. XM_001926711.3.
UniGeneiSsc.9761.

Genome annotation databases

EnsembliENSSSCT00000002649; ENSSSCP00000002582; ENSSSCG00000002382.
GeneIDi100158015.
KEGGissc:100158015.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT737372 Genomic DNA. No translation available.
RefSeqiXP_001926746.1. XM_001926711.3.
UniGeneiSsc.9761.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000002649; ENSSSCP00000002582; ENSSSCG00000002382.
GeneIDi100158015.
KEGGissc:100158015.

Organism-specific databases

CTDi10972.

Phylogenomic databases

GeneTreeiENSGT00550000074954.
InParanoidiF1S2Q3.
OMAiVCFESKS.
OrthoDBiEOG7PZRZM.
TreeFamiTF313729.

Family and domain databases

InterProiIPR009038. GOLD.
IPR015720. TMP21-related.
[Graphical view]
PANTHERiPTHR22811. PTHR22811. 1 hit.
PfamiPF01105. EMP24_GP25L. 1 hit.
[Graphical view]
PROSITEiPS50866. GOLD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Porcine genome sequencing project
    Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiF1S2Q3_PIG
AccessioniPrimary (citable) accession number: F1S2Q3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: July 11, 2012
Last modified: February 4, 2015
This is version 25 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.