F1S2Q3 (F1S2Q3_PIG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSSSCP00000002582

Gene names

Name:

TMED10 Ensembl ENSSSCP00000002582

Organism

Sus scrofa (Pig) [Reference proteome] Ensembl ENSSSCP00000002582

Taxonomic identifier

9823 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Cetartiodactyla › Suina › Suidae › Sus

Protein attributes

Sequence length	219 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Single-pass type I membrane protein By similarity RuleBase RU003827.
Sequence similarities	Belongs to the EMP24/GP25L family. RuleBase RU003827 Contains 1 GOLD domain. RuleBase RU003827 SAAS SAAS009038
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSSSCP00000002582

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS009038
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	COPI-coated vesicle budding Inferred from electronic annotation. Source: Compara Golgi organization Inferred from electronic annotation. Source: Compara beta-amyloid formation Inferred from electronic annotation. Source: Compara intracellular protein transport Inferred from electronic annotation. Source: Compara regulated secretory pathway Inferred from electronic annotation. Source: Compara
Cellular_component	Golgi apparatus Inferred from electronic annotation. Source: Compara endoplasmic reticulum Inferred from electronic annotation. Source: Compara endoplasmic reticulum-Golgi intermediate compartment Inferred from electronic annotation. Source: Compara gamma-secretase complex Inferred from electronic annotation. Source: Compara integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW secretory granule membrane Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F1S2Q3 [UniParc]. Last modified July 11, 2012. Version 2. Checksum: D47F4CD9B6E3C773	FASTA	219	24,911
	10 20 30 40 50 60 MSGLSDPQAL RGPCPLALLL LFLLGPSSVL TISFHLPVNS RKCLREEIHK DLLVTGAYEI 70 80 90 100 110 120 TDQSGGAGGP RTHLKITDSA GHILYSKEDA TKGKFAFTTE DYDMFEVCFE SKGTGRIPDQ 130 140 150 160 170 180 LVILDMKHGV EAKNYEEIAK VEKLKPLEVE LRRLEDLSES IVNDFAYMKK REEEMRDTNE 190 200 210 STNTRVLYFS IFSMFCLIGL ATWQVFYLRR FFKAKKLIE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Porcine genome sequencing project Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (MAY-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT737372 Genomic DNA. No translation available.
RefSeq	XP_001926746.1. XM_001926711.2.
UniGene	Ssc.9761.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSSSCT00000002649; ENSSSCP00000002582; ENSSSCG00000002382.
GeneID	100158015.
KEGG	ssc:100158015.
Phylogenomic databases
GeneTree	ENSGT00550000074954.
OMA	YSKEDAS.
Family and domain databases
InterPro	IPR009038. GOLD. [Graphical view]
Pfam	PF01105. EMP24_GP25L. 1 hit. [Graphical view]
PROSITE	PS50866. GOLD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

F1S2Q3_PIG

Accession

Primary (citable) accession number: F1S2Q3

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	July 11, 2012
Last modified:	November 28, 2012
This is version 14 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)