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F1S2Q3

- F1S2Q3_PIG

UniProt

F1S2Q3 - F1S2Q3_PIG

Protein
Submitted name:

Uncharacterized protein

Gene

TMED10

Organism
Sus scrofa (Pig)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 2 (11 Jul 2012)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. beta-amyloid formation Source: Ensembl
    2. COPI-coated vesicle budding Source: Ensembl
    3. Golgi organization Source: Ensembl
    4. intracellular protein transport Source: Ensembl
    5. regulated secretory pathway Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:TMED10Imported
    OrganismiSus scrofa (Pig)Imported
    Taxonomic identifieri9823 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
    ProteomesiUP000008227: Chromosome 7

    Subcellular locationi

    Membrane UniRule annotation; Single-pass type I membrane protein UniRule annotation

    GO - Cellular componenti

    1. endoplasmic reticulum Source: Ensembl
    2. endoplasmic reticulum-Golgi intermediate compartment Source: Ensembl
    3. gamma-secretase complex Source: Ensembl
    4. Golgi membrane Source: GOC
    5. integral component of membrane Source: UniProtKB-KW
    6. secretory granule membrane Source: Ensembl

    Keywords - Cellular componenti

    Membrane

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the EMP24/GP25L family.UniRule annotation
    Contains 1 GOLD domain.UniRule annotation
    Contains GOLD domain.SAAS annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00550000074954.
    OMAiILYAKED.
    OrthoDBiEOG7PZRZM.
    TreeFamiTF313729.

    Family and domain databases

    InterProiIPR009038. GOLD.
    IPR015720. TMP21-related.
    [Graphical view]
    PANTHERiPTHR22811. PTHR22811. 1 hit.
    PfamiPF01105. EMP24_GP25L. 1 hit.
    [Graphical view]
    PROSITEiPS50866. GOLD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F1S2Q3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSGLSDPQAL RGPCPLALLL LFLLGPSSVL TISFHLPVNS RKCLREEIHK    50
    DLLVTGAYEI TDQSGGAGGP RTHLKITDSA GHILYSKEDA TKGKFAFTTE 100
    DYDMFEVCFE SKGTGRIPDQ LVILDMKHGV EAKNYEEIAK VEKLKPLEVE 150
    LRRLEDLSES IVNDFAYMKK REEEMRDTNE STNTRVLYFS IFSMFCLIGL 200
    ATWQVFYLRR FFKAKKLIE 219
    Length:219
    Mass (Da):24,911
    Last modified:July 11, 2012 - v2
    Checksum:iD47F4CD9B6E3C773
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT737372 Genomic DNA. No translation available.
    RefSeqiXP_001926746.1. XM_001926711.3.
    UniGeneiSsc.9761.

    Genome annotation databases

    EnsembliENSSSCT00000002649; ENSSSCP00000002582; ENSSSCG00000002382.
    GeneIDi100158015.
    KEGGissc:100158015.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT737372 Genomic DNA. No translation available.
    RefSeqi XP_001926746.1. XM_001926711.3.
    UniGenei Ssc.9761.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSSSCT00000002649 ; ENSSSCP00000002582 ; ENSSSCG00000002382 .
    GeneIDi 100158015.
    KEGGi ssc:100158015.

    Organism-specific databases

    CTDi 10972.

    Phylogenomic databases

    GeneTreei ENSGT00550000074954.
    OMAi ILYAKED.
    OrthoDBi EOG7PZRZM.
    TreeFami TF313729.

    Family and domain databases

    InterProi IPR009038. GOLD.
    IPR015720. TMP21-related.
    [Graphical view ]
    PANTHERi PTHR22811. PTHR22811. 1 hit.
    Pfami PF01105. EMP24_GP25L. 1 hit.
    [Graphical view ]
    PROSITEi PS50866. GOLD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Porcine genome sequencing project
      Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Ensembl
      Submitted (MAY-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiF1S2Q3_PIG
    AccessioniPrimary (citable) accession number: F1S2Q3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: July 11, 2012
    Last modified: October 1, 2014
    This is version 22 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3