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Protein
Submitted name:

Nei like DNA glycosylase 3

Gene

NEIL3

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Nei like DNA glycosylase 3Imported
Gene namesi
Name:NEIL3Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiF1RT18
PRIDEiF1RT18

Expressioni

Gene expression databases

BgeeiENSSSCG00000015771

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000016711

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 139FPG_CATInterPro annotationAdd BLAST138
Domaini249 – 283FPG-typeInterPro annotationAdd BLAST35
Domaini319 – 348RanBP2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IETI Eukaryota
ENOG410ZE81 LUCA
GeneTreeiENSGT00730000110955
InParanoidiF1RT18
KOiK10569
OMAiIHFGMKG
OrthoDBiEOG091G038I
TreeFamiTF331502

Family and domain databases

Gene3Di3.20.190.10, 1 hit
InterProiView protein in InterPro
IPR015886 DNA_glyclase/AP_lyase_DNA-bd
IPR015887 DNA_glyclase_Znf_dom_DNA_BS
IPR012319 FPG_cat
IPR035937 MutM-like_N-ter
IPR010979 Ribosomal_S13-like_H2TH
IPR000214 Znf_DNA_glyclase/AP_lyase
IPR010666 Znf_GRF
IPR001876 Znf_RanBP2
IPR036443 Znf_RanBP2_sf
PfamiView protein in Pfam
PF06831 H2TH, 1 hit
PF06839 zf-GRF, 2 hits
PF00641 zf-RanBP, 1 hit
SMARTiView protein in SMART
SM01232 H2TH, 1 hit
SM00547 ZnF_RBZ, 1 hit
SUPFAMiSSF46946 SSF46946, 1 hit
SSF81624 SSF81624, 1 hit
SSF90209 SSF90209, 1 hit
PROSITEiView protein in PROSITE
PS51068 FPG_CAT, 1 hit
PS01242 ZF_FPG_1, 1 hit
PS51066 ZF_FPG_2, 1 hit
PS01358 ZF_RANBP2_1, 1 hit
PS50199 ZF_RANBP2_2, 1 hit

Sequencei

Sequence statusi: Complete.

F1RT18-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEGPGCTLN GEKIRARVRP GQAVTDVRGS ALQNAGGPGL PLSASETVVP
60 70 80 90 100
SQAIALNNNK LCSQNSLRLL NGHVYSGVET LGKELFMYFG PKALRIHFGM
110 120 130 140 150
KGSLAINPLE SKSKNGVSPV FEVQLTKDLI CFFDSSVEIR NTAESQQRIR
160 170 180 190 200
MMEELDVCSP KFSFSRAERE VKKQGGRMLC DVLMDQKVLP GVGNIIKNEA
210 220 230 240 250
LFDSGLHPAV KVCQLTDEQT HHLVKMIHDF SILFYRCCKA GSAVSKHYKV
260 270 280 290 300
YKRPNCGQCF CKITVCRLGE NNRMTYFCPH CQKENPQHVD ICLLPARNTF
310 320 330 340 350
VPWPSSRENH FTDCVARKSE EQWTCEVCTL INKPSSQACD ACLSSRPVDS
360 370 380 390 400
VLENKENPTA LNNLVKYPCN SFGKPRTEVK INRKTAFGTT TLVLTDFSNK
410 420 430 440 450
SSALKREESQ KQILDGEFPN PLSSPERANY ITQLSNKVNV LPMICTQSKI
460 470 480 490 500
FSPAYTNLKT THYSSPDHKT CNPGFSNSEL QINTTDGPHT LNAGSPRCSK
510 520 530 540 550
HGRPCILRVV RKDGENKGRQ FYACPLPREA QCGFFEWADL SFPFCNHGKR
560 570 580 590
SIMRTVLKIG PNNGKNFFVC PLGKEKQCNF FQWAENGPGI NIIPGC
Length:596
Mass (Da):66,365
Last modified:May 3, 2011 - v1
Checksum:i01577D2D3A0E6F27
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000099 Genomic DNA No translation available.
RefSeqiXP_001926185.2, XM_001926150.4
UniGeneiSsc.31258

Genome annotation databases

EnsembliENSSSCT00000017172; ENSSSCP00000016711; ENSSSCG00000015771
GeneIDi100156631
KEGGissc:100156631

Entry informationi

Entry nameiF1RT18_PIG
AccessioniPrimary (citable) accession number: F1RT18
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: May 23, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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