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Protein
Submitted name:

Transmembrane protein 116

Gene

TMEM116

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Transmembrane protein 116Imported
Gene namesi
Name:TMEM116Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 14

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 45HelicalSequence analysisAdd BLAST26
Transmembranei57 – 78HelicalSequence analysisAdd BLAST22
Transmembranei98 – 115HelicalSequence analysisAdd BLAST18
Transmembranei143 – 165HelicalSequence analysisAdd BLAST23
Transmembranei203 – 227HelicalSequence analysisAdd BLAST25
Transmembranei258 – 278HelicalSequence analysisAdd BLAST21
Transmembranei290 – 314HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF1RJK9.

Expressioni

Gene expression databases

BgeeiENSSSCG00000009893.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini36 – 311G_PROTEIN_RECEP_F1_2InterPro annotationAdd BLAST276

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IUMT. Eukaryota.
ENOG4111IGA. LUCA.
GeneTreeiENSGT00390000003209.
InParanoidiF1RJK9.
OMAiFFCCWGP.
OrthoDBiEOG091G0DBN.
TreeFamiTF330947.

Family and domain databases

InterProiView protein in InterPro
IPR022343. GCR1-cAMP_receptor.
IPR017452. GPCR_Rhodpsn_7TM.
PRINTSiPR02001. GCR1CAMPR.
PROSITEiView protein in PROSITE
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.

Sequencei

Sequence statusi: Complete.

F1RJK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFLLEASIL EDTLDSFFSA IQWIQFVMAT LSVIGSSSLI AYAIFQNIQK
60 70 80 90 100
SPEIRPIFYL SFSDLLLGIC WLMEALLYGT SAASKDIFCY NLQAVGQIFY
110 120 130 140 150
ISSFLYTVYY IWYLYKELRM KHNQSGQSTF LPVIDHTYQV GQIVIVLSSL
160 170 180 190 200
IPLLLMIPVF CLGNASECFR NFSQSHRCIL MYSPPSAMAE LLPSANTSVC
210 220 230 240 250
STLYFYGLII FLASFLLSLF IIVVLLIQAQ ALFKKFVKST GFLGSEQWAA
260 270 280 290 300
IHIVEQQVLF YPVAFFCCWG PAAILMIIKL MKPQDTKLHM ALYVLQALTG
310 320 330 340 350
SSQGLLNCGV YGWTQYKFHQ LKQKARRDAD TQTPLLCSQK RFYSRGLSPL
360
ESTLAFATST SDIF
Length:364
Mass (Da):41,137
Last modified:November 22, 2017 - v3
Checksum:iAB09E43064DCF503
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000096 Genomic DNA. No translation available.
RefSeqiXP_005657383.1. XM_005657326.2.

Genome annotation databases

EnsembliENSSSCT00000010843; ENSSSCP00000010560; ENSSSCG00000009893.
GeneIDi100156224.

Similar proteinsi

Entry informationi

Entry nameiF1RJK9_PIG
AccessioniPrimary (citable) accession number: F1RJK9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 22, 2017
Last modified: December 20, 2017
This is version 33 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported