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Protein
Submitted name:

Cytokine receptor family member B16

Gene

crfb16

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-DRE-8854691. Interleukin-20 family signaling.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytokine receptor family member B16Imported
Gene namesi
Name:crfb16Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 2

Organism-specific databases

ZFINiZDB-GENE-071120-9. crfb16.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei220 – 242HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_500326906824 – 300Sequence analysisAdd BLAST277

Proteomic databases

PaxDbiF1RA83.

Expressioni

Gene expression databases

BgeeiENSDARG00000075181.
ExpressionAtlasiF1RA83. baseline.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000090421.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 111Fibronectin type-IIIInterPro annotationAdd BLAST102

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IN8F. Eukaryota.
ENOG410YRNK. LUCA.
GeneTreeiENSGT00510000048354.
InParanoidiF1RA83.
OMAiPFNRNST.
OrthoDBiEOG091G0CVQ.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiView protein in InterPro
IPR003961. FN3_dom.
IPR036116. FN3_sf.
IPR013783. Ig-like_fold.
PfamiView protein in Pfam
PF01108. Tissue_fac. 1 hit.
SUPFAMiSSF49265. SSF49265. 1 hit.

Sequencei

Sequence statusi: Complete.

F1RA83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCSGLIDSLF LLLLYFSIHH SASLSTYLNI SMHSVNMKHI LKWSQLQTAC
60 70 80 90 100
STFNHTVQFQ GEYELHKLNG SWVDAYDCQE IRENRCDLTH DLASNSDYSI
110 120 130 140 150
RIKTNCDGQK SWTQLPKTFN RKDTVLLTPE MIVNVEGDPI QVGFNTTLSA
160 170 180 190 200
ITVKLKVWTE GDEQNALTDM TRAYPYHFSI AAHRGKEKMC FRAEALVDAI
210 220 230 240 250
NKSCSTDTQC VIMHKQTSDM PVIVSVAVVI ALAVAFILGW SVTRFSPQIK
260 270 280 290 300
HIICHREPIP SALLNNCPAR APNLFTVSSE PTEPLLVLVP TLVQMETNER
Length:300
Mass (Da):33,776
Last modified:May 3, 2011 - v1
Checksum:i025DF82171AAF7E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX120016 Genomic DNA. No translation available.
CU467941 Genomic DNA. No translation available.
RefSeqiXP_005163304.1. XM_005163247.3.
UniGeneiDr.126042.

Genome annotation databases

EnsembliENSDART00000099647; ENSDARP00000090421; ENSDARG00000075181.
GeneIDi100174902.

Similar proteinsi

Entry informationi

Entry nameiF1RA83_DANRE
AccessioniPrimary (citable) accession number: F1RA83
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: March 28, 2018
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported