F1R9E8 (F1R9E8_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSDARP00000010443

Gene names

Name:

gad2 Ensembl ENSDARP00000010443 ZFIN ZDB-GENE-030909-9

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome] Ensembl ENSDARP00000010443

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	583 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000010443

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	gamma-aminobutyric acid biosynthetic process Inferred from expression pattern PubMed 9634146. Source: ZFIN neurotransmitter biosynthetic process Inferred from expression pattern PubMed 9634146. Source: ZFIN
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	F1R9E8 [UniParc]. Last modified May 3, 2011. Version 1. Checksum: CFEDA3A6F5BD51CF	FASTA	583	65,458
	10 20 30 40 50 60 MASHGFWFLG AENAAGNGSQ SPNTPRAWCQ AAAQKFSGGI GSKLCALLNV GEAEKAAQAP 70 80 90 100 110 120 VKAEDESTAE SCGCNKPCNC SKATACFSDL YSTDLLPALD GDAKTMNFLQ EVVDILLAYI 130 140 150 160 170 180 VESFDRSTKV IDFHYPNELL QRNNWELSDE PETLDDILIS CRATLKYAIK TAHPRYFNQL 190 200 210 220 230 240 STGLDMVGLA ADWLTSTANT NMFTYEVAPV FVLLEYVTLK KMREIIGWQD GHGDGIFSPG 250 260 270 280 290 300 GAISNMYAML LARYKMFPEV KEKGMSSVPR LVAFTSEHSH FSIKKGAAAL GIGTESVICI 310 320 330 340 350 360 KADERGKMIP SDLERRIIEA KQKGYVPFFV SATAGTTVYG AFDPLIAIAD ICKKHDVWMH 370 380 390 400 410 420 VDGAWGGSLL MSRKHRWKLN GVERANSMTW NPHKMMAVPL QCSALLVREE GLMQSCNQMQ 430 440 450 460 470 480 ACYLFQQDKH YDLQYDTGDK ALQCGRHVDI FKLWLMWRAK GTIGFEAQID KCLELSEYLY 490 500 510 520 530 540 NKIKDREGYQ MVFDGKPQHT NVCFWYLPPG VRYLEDKVER MKRLHKVAPV IKARMMEYGT 550 560 570 580 TMVSYQPQGD KVNFFRMVIS NPAATFEDID FLIEEIERLG QDL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000010443.
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000010443.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX530066 Genomic DNA. No translation available. CR855137 Genomic DNA. No translation available.
IPI	IPI00498585.
RefSeq	NP_001017708.2. NM_001017708.2.
UniGene	Dr.81033.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000021609; ENSDARP00000010443; ENSDARG00000015537.
GeneID	550403.
KEGG	dre:550403.
Organism-specific databases
CTD	2572.
ZFIN	ZDB-GENE-030909-9. gad2.
Phylogenomic databases
GeneTree	ENSGT00550000074275.
KO	K01580.
Gene expression databases
ArrayExpress	F1R9E8.
Bgee	F1R9E8.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR021115. Pyridoxal-P_BS. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20879652.

Entry information

Entry name

F1R9E8_DANRE

Accession

Primary (citable) accession number: F1R9E8

Entry history

Integrated into UniProtKB/TrEMBL:	May 3, 2011
Last sequence update:	May 3, 2011
Last modified:	March 6, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)