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Protein
Submitted name:

Zinc finger protein ZFPM1

Gene

zfpm1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-DRE-983231. Factors involved in megakaryocyte development and platelet production.

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein ZFPM1Imported
Gene namesi
Name:zfpm1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 18

Organism-specific databases

ZFINiZDB-GENE-050419-238. zfpm1.

PTM / Processingi

Proteomic databases

PaxDbiF1R5J3.

Expressioni

Gene expression databases

BgeeiENSDARG00000041572.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000060948.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini255 – 288CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini309 – 338C2H2-typeInterPro annotationAdd BLAST30
Domaini339 – 366C2H2-typeInterPro annotationAdd BLAST28
Domaini629 – 662CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini762 – 795CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini895 – 928CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini1153 – 1186CCHC FOG-typeInterPro annotationAdd BLAST34

Sequence similaritiesi

Belongs to the FOG (Friend of GATA) family.PROSITE-ProRule annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
OMAiYSCPAAP.
OrthoDBiEOG091G00RC.
TreeFamiTF331342.

Family and domain databases

InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 10 hits.
SUPFAMiSSF57667. SSF57667. 6 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 5 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.

Sequencei

Sequence statusi: Complete.

F1R5J3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRRKQSKPR QIKRSIGDLN GGEDPSDDVS MSGEEGGASD QEDSAECDGS
60 70 80 90 100
SPHSFTPLYN EEPRTHESLA MADEGEEDEK GLKRCTEDEE EEEVDREGEP
110 120 130 140 150
QWNGPDDLVL SGSSDDFKVL ALRDLSGDTV WGPFSGSIQS GEPTDGPASE
160 170 180 190 200
SSAVSLVCEE PDCWLRRIPV TSNPTDSNCT IYSQGGVLFC KLTRELSGGD
210 220 230 240 250
ALLASLSSSN GDHSAGTQTH GVRVKEEPAY PAALHSEIQL LPQQAGMAAI
260 270 280 290 300
LATAVVNKDI FPCKDCGIWY RSERNLQAHL MYYCASRQKQ QTAASPPQDK
310 320 330 340 350
PKDSYPNERL CPFPQCNKSC PSASSLEIHM RTHSGERPFV CLICLSAFTT
360 370 380 390 400
KANCERHLKV HTDSLNGVCH GCGFISTTRD ILYSHLVTSH MVCQPGSNSE
410 420 430 440 450
VYSPKLPVAA GLSPGDSGIV LKCQVCGYSA DTPALLQQHV HTHLEVRVPA
460 470 480 490 500
ERSPTPRQSS PPSSELPELQ ETEPAACVPR PDSSSPGANG SSASQGYSPL
510 520 530 540 550
SQLNIKEEPR SDYENDAKEE EQVNSPQENA AEASSSQPTS PKSPTVVAVK
560 570 580 590 600
AEPASPTPGS SPAHSGTGGS VLPGGAVFLP QYMFNSEAAI MPQASEILAK
610 620 630 640 650
MSEMVHSRLK QGQGPAAAQQ SFYPPGSPAS VHKGATCFEC DITFNNINNF
660 670 680 690 700
YVHKRLYCSS RHQQGETGGL VKEGAVTAAA PPVSHAASPQ ARPVSRAASA
710 720 730 740 750
SPSCPDPAPG GTASEPKVVE VKIEDPGLKD ATCSSSSEGE GPGGGQASEG
760 770 780 790 800
SQSPSGSAED QDDDPTRTFC QACNIRFSRH DNYIVHKRFY CASRHDPTNQ
810 820 830 840 850
RPHSGKAAFL PQPIRTRKRK KMYEIHMAQT EALANATTLP AGTSLGVNQE
860 870 880 890 900
GSSVALLSQV STPTRSSSPE GEGPIDLSKR PRLRESQRKD SISALPLSDY
910 920 930 940 950
HKCTACSISF NSIENYLAHK TYYCPATTLQ PQTMEQLNRL KRPTSTSPKN
960 970 980 990 1000
RAVDQHSDSK VLQTGKTAAV AHAVPGSEST PPHVQGAKTP STSPVVCPYC
1010 1020 1030 1040 1050
PPNKLLTCDL MEHFKTTHGL VLTLQQHPET QSTGVSPSPS LSPREGAPLT
1060 1070 1080 1090 1100
PPKPSSRPRK DSLNGRSIKL EATSPSPPVL NGSSLESVGS RSPKTAPPAL
1110 1120 1130 1140 1150
SPKGVTVSPV PEALRETGQL SHTPLPSVLP EKAALAISHT ITAPPKTPLA
1160 1170 1180 1190
SPLQNGNTRY CRLCNIKFSS LSTFIAHKKY YCSSHSAEHV K
Length:1,191
Mass (Da):127,147
Last modified:May 3, 2011 - v1
Checksum:iBB6CFA29AB7CBCD5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT025944 Genomic DNA. No translation available.
CU313320 Genomic DNA. No translation available.
CU459029 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSDART00000060949; ENSDARP00000060948; ENSDARG00000041572.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT025944 Genomic DNA. No translation available.
CU313320 Genomic DNA. No translation available.
CU459029 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000060948.

Proteomic databases

PaxDbiF1R5J3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000060949; ENSDARP00000060948; ENSDARG00000041572.

Organism-specific databases

ZFINiZDB-GENE-050419-238. zfpm1.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00530000063823.
OMAiYSCPAAP.
OrthoDBiEOG091G00RC.
TreeFamiTF331342.

Enzyme and pathway databases

ReactomeiR-DRE-983231. Factors involved in megakaryocyte development and platelet production.

Gene expression databases

BgeeiENSDARG00000041572.

Family and domain databases

InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 10 hits.
SUPFAMiSSF57667. SSF57667. 6 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 5 hits.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiF1R5J3_DANRE
AccessioniPrimary (citable) accession number: F1R5J3
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: May 10, 2017
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.