Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

F1QRB8 (F1QRB8_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length392 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the serpin family. RuleBase RU000411

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Glycosylation2031N-linked (GlcNAc...) PDB 4DTE

Sequences

Sequence LengthMass (Da)Tools
F1QRB8 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 583E1166BCCEA0F3

FASTA39243,870
        10         20         30         40         50         60 
MQSLSVLLIF ALCASSLCNL IQDKQTDFGL QVFAEAVQSA PDRNLALSPY GIASVLGMAQ 

        70         80         90        100        110        120 
MGAYGATLKL LASKMGYSLQ ERGMPKLQRL LQRDLASEDG VEVASGVMVD RKIILEKVFR 

       130        140        150        160        170        180 
RSLSKAFQSV PHQIDFSQPE MARQVINSWT SDHTDGMISE FLPSGVLSEL TRLVFLNALH 

       190        200        210        220        230        240 
FHGVWKTPFD PRNTREQLFH TVNGSAVSVP MMTTTQKFNY GEFVSKDGVD YDVIEMPYEG 

       250        260        270        280        290        300 
ESISMLLVTP FEKDVPLSAL NKELSSSRIH QWRQEMRKIS KQLSIPRFSM DTEIDLKSTL 

       310        320        330        340        350        360 
SRMGLGDIFS QSRADFSRIT TEEPLCVSKV LQRVKLEVNE EGTKGSSATA AVIYSRMAVE 

       370        380        390 
EITLDRPFFF LIQHKPTGAL LFSGQLTQPQ EY 

« Hide

References

« Hide 'large scale' references
[1]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000073803.
[2]"Characterization of Fish PAI-1."
Bager R., Johansen J.S., Jensen J.K., Stensballe A., Jendroszek A., Sorensen H.P., Andreasen P.A.
Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Protein conformational change delayed by steric hindrance from an N-linked glycan."
Bager R., Johansen J.S., Jensen J.K., Stensballe A., Jendroszek A., Buxbom L., Sorensen H.P., Andreasen P.A.
J. Mol. Biol. 425:2867-2877(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.96 ANGSTROMS) OF 19-392, GLYCOSYLATION AT ASN-203.
[4]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000073803.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX470232 Genomic DNA. No translation available.
JQ801452 mRNA. Translation: AFL47814.1.
RefSeqXP_005172302.1. XM_005172245.1.
UniGeneDr.119909.
Dr.125717.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4DTEX-ray1.96A/B19-392[»]
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

MEROPSI04.020.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000079347; ENSDARP00000073803; ENSDARG00000056795.
GeneID100136840.
KEGGdre:100136840.

Organism-specific databases

CTD5054.
ZFINZDB-GENE-070912-60. serpine1.

Phylogenomic databases

GeneTreeENSGT00740000115460.
KOK03982.
OMANAWVSDH.
OrthoDBEOG7327PB.
TreeFamTF352620.

Family and domain databases

InterProIPR023795. Serpin_CS.
IPR023796. Serpin_dom.
IPR000215. Serpin_fam.
[Graphical view]
PANTHERPTHR11461. PTHR11461. 1 hit.
PfamPF00079. Serpin. 1 hit.
[Graphical view]
SMARTSM00093. SERPIN. 1 hit.
[Graphical view]
SUPFAMSSF56574. SSF56574. 1 hit.
PROSITEPS00284. SERPIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROF1QRB8.

Entry information

Entry nameF1QRB8_DANRE
AccessionPrimary (citable) accession number: F1QRB8
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 16, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)