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F1QPT7 (F1QPT7_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1564 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Contains ABC transmembrane type-1 domains. SAAS SAAS011527

Contains ABC transmembrane type-domains. SAAS SAAS011527

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000097992

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 Ensembl ENSDARP00000097992

Sequences

Sequence LengthMass (Da)Tools
F1QPT7 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 7C1F228658C0FBF5

FASTA1,564175,103
        10         20         30         40         50         60 
VCQNSSFLQR EDPDLPVCVE RTVLVWLPLA FLWICSPFHF RSFCQKSAKA PASALYYCKQ 

        70         80         90        100        110        120 
QVVAGLLLLT AVAELAVTLG EDFGPSSDED AQKNPAVLYT NPVLFAVSWI VVMLCQESMR 

       130        140        150        160        170        180 
HRLMCVDSGS LFMFWLLQVV CAVFQFQTLL RVCVSQGISD VPRFCLFYIS YGLQIIALVL 

       190        200        210        220        230        240 
SAIADVSPEA KKVAETNPEA KATFLSRITF NWFNSMVWKG FKRPLVQEDM WDLNKNDSTH 

       250        260        270        280        290        300 
FICQTFEDVM AKELKKARNN LQKKKSKKRK TVDAEGQNGL AKGVSQDVLV MLSCNKQQTA 

       310        320        330        340        350        360 
KKTQKLEYKD ALDSDSDYPQ SWLVTTIVKS FKGVLLESAL FKLLQDLLSF ASPQLLKLMI 

       370        380        390        400        410        420 
AFTQNKDSYA WTGYLYAVLL VLVAFVQSVV LQQYFQRCFI LGMKVRTAIM AAVYKKALVV 

       430        440        450        460        470        480 
SNDSRKESTA GEIVNLMSAD AQRFNDVTNF IHLLWSCPLQ IALSIAFLWI ELGPSVLSGL 

       490        500        510        520        530        540 
LVMVLMVPIN GWLATKSRQF QMQNMKFKDS RMKIVNDLLN GIKILKYYAW ETSFEAQVQE 

       550        560        570        580        590        600 
IREKELKVMR KFAYLSSVST FIFSCAPALV SLATFAVFVS VSPDNILDAE KAFTSISLFN 

       610        620        630        640        650        660 
ILRFPLAMLP QLISIMVQTS VSKKRLEKFL SGDDLDTTTV THDSSITAAV SMTNGTYAWE 

       670        680        690        700        710        720 
RDTEPVLKQV SLDIKPGRLV AVVGAVGSGK TSLVSALLGE LHSIKGNINI NGSVAYVPQQ 

       730        740        750        760        770        780 
AWIQNATLKD NILFGSSVDE ERYQSVIKAC ALGPDLDLLP GRDQTEIGEK GINLSGGQKQ 

       790        800        810        820        830        840 
RVSLARAVYS SADVYLLDDP LSAVDSHVGK HLFEKVIGPN GLLRDKTRIL VTHGISFLPY 

       850        860        870        880        890        900 
VDEIVVLVHG VVSEIGSYES LRASKGAFSE FLETYGKDES NKDNDKKETA AAAQTPVYEE 

       910        920        930        940        950        960 
IETLPEGLET QADGSPEDIV SSTLKRENSL RHSQRHSKRN GSVKVRKNSS LRAQKDPEDK 

       970        980        990       1000       1010       1020 
KGQRLIEKEM METGRVKFSV YLQYLSAMGW WYVGFSFVFY FIQNVAVIGQ NLWLSDWTDD 

      1030       1040       1050       1060       1070       1080 
SIEYFNQTYP NHIRDTRIGV FGALGLAQGF LVFFGTILLA DGSISASRTL HTSLLTNILK 

      1090       1100       1110       1120       1130       1140 
VPMMFFDTTP SGRIVNRFAK DIFTVDEMIP MSFRSWILCL LGVLGTLFVI CLATPIFTAV 

      1150       1160       1170       1180       1190       1200 
VVPMAVVYYF VQRFYVATSR QLRRLDSVSR SPIYSHFGET VSGLSVIRAY GHQDRFLKHN 

      1210       1220       1230       1240       1250       1260 
EHTIDQNLKS VYPWIVSNRW LAMRLESLGN LVVFFAALFA VISRDSLNSG LVGLSISYAL 

      1270       1280       1290       1300       1310       1320 
NVTQTLNWLV RMTSELETNI VAVERVREYA EIQNEAPWVT SVRPPDDWPS AGNIRFEDYK 

      1330       1340       1350       1360       1370       1380 
VRYRPELELV LHGVTCDIQS TEKIGIVGRT GAGKSSLTNC LFRIVEAADG RILIDDIDIA 

      1390       1400       1410       1420       1430       1440 
TLGLHDLRSR LTIIPQDPVL FSGTLRMNLD PFQTFSDAEI WSVLELAHLK EYVRGLPTGL 

      1450       1460       1470       1480       1490       1500 
EHEVSEGGEN LSALGQRQLL CLARALLRKS RILILDEATA AVDLETDDLI QSTIRREFSH 

      1510       1520       1530       1540       1550       1560 
CTVLTIAHRL NTILDSSRVM VLDSGKIVEF DSPNELLSKP GHFSSMAEDA GIRREEEQSQ 


SYVF 

« Hide

References

« Hide 'large scale' references
[1]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000097992.
[2]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000097992.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU462915 Genomic DNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000114538; ENSDARP00000097992; ENSDARG00000014031.

Organism-specific databases

ZFINZDB-GENE-040426-1523. abcc2.

Phylogenomic databases

OMADRFLKHN.
TreeFamTF105199.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR001140. ABC_transptr_TM_dom.
IPR005292. Multidrug-R_assoc.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00664. ABC_membrane. 2 hits.
PF00005. ABC_tran. 2 hits.
[Graphical view]
SMARTSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMSSF52540. SSF52540. 2 hits.
SSF90123. SSF90123. 2 hits.
TIGRFAMsTIGR00957. MRP_assoc_pro. 1 hit.
PROSITEPS50929. ABC_TM1F. 2 hits.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

PROF1QPT7.

Entry information

Entry nameF1QPT7_DANRE
AccessionPrimary (citable) accession number: F1QPT7
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)