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Protein
Submitted name:

Nexilin (F actin-binding protein)

Gene

nexn

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

  • cardiac muscle fiber development Source: ZFIN
  • regulation of cell migration Source: GO_Central
  • regulation of cytoskeleton organization Source: GO_Central

Names & Taxonomyi

Protein namesi
Submitted name:
Nexilin (F actin-binding protein)Imported
Gene namesi
Name:nexnImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 8

Organism-specific databases

ZFINiZDB-GENE-041114-92. nexn.

Subcellular locationi

PTM / Processingi

Proteomic databases

PRIDEiF1QGT0.

Expressioni

Gene expression databases

BgeeiENSDARG00000057317.
ExpressionAtlasiF1QGT0. baseline and differential.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000074386.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini767 – 855Ig-likeInterPro annotationAdd BLAST89

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili141 – 171Sequence analysisAdd BLAST31
Coiled coili219 – 265Sequence analysisAdd BLAST47
Coiled coili296 – 323Sequence analysisAdd BLAST28
Coiled coili352 – 390Sequence analysisAdd BLAST39
Coiled coili415 – 451Sequence analysisAdd BLAST37
Coiled coili479 – 517Sequence analysisAdd BLAST39
Coiled coili560 – 603Sequence analysisAdd BLAST44
Coiled coili637 – 669Sequence analysisAdd BLAST33
Coiled coili698 – 743Sequence analysisAdd BLAST46

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IF6R. Eukaryota.
ENOG4110P6X. LUCA.
GeneTreeiENSGT00730000111176.
OMAiWNRRKQE.
OrthoDBiEOG091G06IR.
TreeFamiTF328960.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR007110. Ig-like_dom.
IPR036179. Ig-like_dom_sf.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003599. Ig_sub.
PfamiView protein in Pfam
PF07679. I-set. 1 hit.
SMARTiView protein in SMART
SM00409. IG. 1 hit.
SUPFAMiSSF48726. SSF48726. 1 hit.
PROSITEiView protein in PROSITE
PS50835. IG_LIKE. 1 hit.

Sequencei

Sequence statusi: Complete.

F1QGT0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEVMSMADV STDTHMNNTE SMNDIADVDS ENTVNEENHK EETHDMCCAP
60 70 80 90 100
EEVEMNSAAD EPKETELPEK EKPKQETGRA RKRERVQKTK EEDTSQLENE
110 120 130 140 150
EKADESHDID ITNMSDVALK QEKLLKTSKP VQRSYIPKLG KEDVKNKFEA
160 170 180 190 200
MQKAREERNQ KRSQEEQKKR REQYVKEREY GRRKQMIKEL LASSDEEEEV
210 220 230 240 250
KPTKIEKSYV PKITGSVKGK FAEMEKQRQE EERKRTDEER KKRAAQEAIE
260 270 280 290 300
KAKIQKELAK KAEEEGDDSL LVRVVPAKSQ KQPGRIKINF EDMEKSREEE
310 320 330 340 350
LKKRTEEEKM KRYDENRRSV RESKRRSVVE QLDDGEPQPK EKEQVTPGKL
360 370 380 390 400
RLTFEEQEKE RQEQQRKQAE EEARRRLEEE RKAFEEAKLG MGQEDEDTQD
410 420 430 440 450
THGEKEEFRP GKLRLSFEEL ERQRLEDEHK RVEEERKRRI EEERKAFAEA
460 470 480 490 500
RKSMVINSDD DILLAMINSD GAKPGKLAIS FEDLERQRQE EEQKRKEEEA
510 520 530 540 550
KRRLEEEKRL FAEARKSMSP GVDQDNMTGC GDKEVLDEDE TLVRTESQEG
560 570 580 590 600
LHPGKLEINF EEMLKMKEET ERKRKQEARR QKMEMEKKEF EQLRQEMGEE
610 620 630 640 650
EINESSEVVS AEYEELTKLK RTGSIQAKSL KSKFEKIKQL TEEEIQKKIE
660 670 680 690 700
EERARRKEID EQIKEREAER CQEDEDEDKT SPAKAEDVPF RQKVDMRARF
710 720 730 740 750
EQMAKAREEE QKRKIEEQKL QRMQFEQQEI DAALQKKKDE EEEEEGSIIN
760 770 780 790 800
GSAAYEDEED HARSGAPWFK KPLKNQSVVD AEPVRFTVKI TGEPKPEVTW
810 820 830 840 850
WFEGEPLPDS EDYQYIERGE TYCLYLPETF PEDEGEYMCK AVNSRGTAAS
860
TCILTIETED Y
Length:861
Mass (Da):101,755
Last modified:May 3, 2011 - v1
Checksum:i5C525BD0E541B874
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844185 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSDART00000148802; ENSDARP00000124483; ENSDARG00000057317.

Similar proteinsi

Entry informationi

Entry nameiF1QGT0_DANRE
AccessioniPrimary (citable) accession number: F1QGT0
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: October 25, 2017
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported