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F1QA79 (F1QA79_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length2055 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. SAAS SAAS001214

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains SET domain. SAAS SAAS001214

Contains post-SET domain. SAAS SAAS001214

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSDARP00000078549

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F1QA79 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: FC5206F7F0DBDA1A

FASTA2,055227,772
        10         20         30         40         50         60 
MNQSYKVAGR DGSECRGDPQ DSRALDVRIG SCGQQSTKAD QSSAMHFLNP GYKLSAPFAY 

        70         80         90        100        110        120 
NQRESTSNYS PLRRLQDLTT MVNHADGGLQ DKDFHGRNKL LMHSPIGGNE FGIGLYNTTN 

       130        140        150        160        170        180 
SQGNTAIQDL DKNGFSPVSS DSLEHFSPIS NGFLHFDSTL FDSGDSKDND EDVKGEVATF 

       190        200        210        220        230        240 
KDTSKKCQKR NVAKTETQSS HRLDANKHSS KNTAKSDPPA SPFHVPFTMM EDFDSMDDYS 

       250        260        270        280        290        300 
DSDCDLPSTE NCASIFNLSK RAHSPSDSHS NPSSSPKKKQ LLSVKYSIGD VVWAKFNRRP 

       310        320        330        340        350        360 
WWPCHVTTDP QIDVHTKMKD PSRRPCRLYF VRMFGEIVDQ AWVPAKATFP FEGGDQFEKL 

       370        380        390        400        410        420 
PVLRRRGRQK EKDYKYTVPK RLIPSWKASV LEAEASLTKQ LNSEPPLTLI QDVCVPITED 

       430        440        450        460        470        480 
KAHKKNPACP KSTTLSTPSS SLLSNGLNAS VKNRLKPGTA SKKKATKKMI QSQSIKLSET 

       490        500        510        520        530        540 
PSLFKSKSNP SSDKPSIATD PLDSPYSDID SVPRILCSKR IDESLQVELE KELSTKTTKV 

       550        560        570        580        590        600 
QACKKTSKNS VDKPGKKTDV KCLKNSKLKK STPKDKTLKA TSSRLKESSS PGSSDGSFAM 

       610        620        630        640        650        660 
HSHYLPASSG LIVRALAAGE ETKEKDLSHE PNSHSPSSEH SSQTNHELSK QNWEVKNNSE 

       670        680        690        700        710        720 
SSEESVDASD SPPNPTSIKR IKKRPQKNGI HKDPPPKSHE ESESKVNNES MFSDTSSSSI 

       730        740        750        760        770        780 
PSPSISPMDA FQDIKELSFR SLVKEECSSG ESPLRADSNY KFSTFLMLLK DLHDSREKEG 

       790        800        810        820        830        840 
KPLTLPPTSP SSLIKEEPSL IPVGEEPPNE VLCEKEFAEQ SSLPGKTSTP NNSKQSKAKL 

       850        860        870        880        890        900 
KSTVKKESQK PDVVIDSVSP LKKPISPVGL DVLDKSLPLL GDLPKSSDVS AAVTDVCAKG 

       910        920        930        940        950        960 
TISKVAPKKR WKTFESELGK SIKPKSDQVD STLDEVKSVS TEPNGVFKDG LQESAHSDVP 

       970        980        990       1000       1010       1020 
NKKDASENKR LRKPSKRLIE CGEEYEQIFP SKKKTKKSTE SCKTGSCISN TTPEQPASDQ 

      1030       1040       1050       1060       1070       1080 
ITLDAVSSSS AEKPLDHVVA EEQKPPADVL VPPSAPKSPS CATSLETEPC EKKSAPLERK 

      1090       1100       1110       1120       1130       1140 
RPRKSVHKVL DCAIEGESVK IPKKGESRQH KTNPEESGVR DLEKQEEAGP PPSSPCAVSA 

      1150       1160       1170       1180       1190       1200 
QSEGELRTSS PIQPDVPSVS QIPVEGEQSS PSKPQINNED SLISEGFAAG LNDSAFSSRD 

      1210       1220       1230       1240       1250       1260 
SLSGDLSGLS TNKRSVERGG GASLKENVCQ VCEKTGELLL CEGQCCGAFH LQCIGLTETP 

      1270       1280       1290       1300       1310       1320 
KGRFICQECK MGVHTCFVCK KPDKEVRRCM IPVCGKFYHM DCILKYSPTV AQNRGFRCSI 

      1330       1340       1350       1360       1370       1380 
HVCLSCYITN PNNPGISKGR LTRCVRCPVA YHANDYCMAA GSVPLANNSF LCPNHFTPRK 

      1390       1400       1410       1420       1430       1440 
GCKNHEHINV SWCFVCSEGG SLLCCESCPA AFHRECLNIE MPQGSWFCND CRAGKKPHYK 

      1450       1460       1470       1480       1490       1500 
DILWVKVGRY RWWPAEVTQP KSVPENISRM KHEVGEFPVH FFGSKDYVWT YQARCFPYME 

      1510       1520       1530       1540       1550       1560 
GDANNKEKMG KGADAVYKKA LNEAADRFRE LLKEKEMRQL QEDRKNDKKP PPYKHIKVNK 

      1570       1580       1590       1600       1610       1620 
QIGKVLIITA DLSEIPRCNC KATDENPCGI DSECINRMLL YECHSQVCPA GERCQNQSFT 

      1630       1640       1650       1660       1670       1680 
KRQYTEVEIF RTLSRGWGLR SISDIKKGAF VNEYVGEVID EEECRSRIKN AQDNDICNFY 

      1690       1700       1710       1720       1730       1740 
MLTLDKDRII DAGPKGNESR FMNHSCQPNC ETQKWTVNGD TRVGLFALED IPKGVELTFN 

      1750       1760       1770       1780       1790       1800 
YNLECLGNGK TVCKCGAPNC SGFLGVRPKN QPPSDDKTRK LRRKVSGKRK SQSEVTKERE 

      1810       1820       1830       1840       1850       1860 
DECFYCGDGG QIVSCKKPGC PKVYHADCLN LSKRPAGRWE CPWHQCNECG REAASYCEMC 

      1870       1880       1890       1900       1910       1920 
PNSYCEQHRE GMLFISKLDG KLSCSEHDPC GPDPLEPGEI REYVPSTSIV GQAPNMSASG 

      1930       1940       1950       1960       1970       1980 
RITQPALPPA APLFIPAQNR PAFQSQRDPY GDEVVDNILP SSSPKDIKEE DMSDGEVVFE 

      1990       2000       2010       2020       2030       2040 
EGEEEEEDLE LVDDEDDEEE IDCRGMGLED EEEEEEFEDY EDDFVNVDFV GTEDGDEVEG 

      2050 
DEQETSWDEL VEAEK 

« Hide

References

« Hide 'large scale' references
[1]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000078549.
[2]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000078549.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU633762 Genomic DNA. No translation available.
CU655965 Genomic DNA. No translation available.
CU659412 Genomic DNA. No translation available.
RefSeqXP_683890.4. XM_678798.5.
UniGeneDr.83733.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000084114; ENSDARP00000078549; ENSDARG00000060016.
GeneID556086.
KEGGdre:556086.

Organism-specific databases

CTD556086.
ZFINZDB-GENE-080519-3. nsd1a.

Phylogenomic databases

GeneTreeENSGT00740000114921.
KOK15588.
TreeFamTF329088.

Gene expression databases

BgeeF1QA79.

Family and domain databases

Gene3D3.30.40.10. 3 hits.
InterProIPR006560. AWS.
IPR003616. Post-SET_dom.
IPR000313. PWWP_dom.
IPR001214. SET_dom.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
[Graphical view]
PfamPF00628. PHD. 2 hits.
PF00855. PWWP. 2 hits.
PF00856. SET. 1 hit.
[Graphical view]
SMARTSM00570. AWS. 1 hit.
SM00249. PHD. 4 hits.
SM00508. PostSET. 1 hit.
SM00293. PWWP. 2 hits.
SM00184. RING. 2 hits.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF57903. SSF57903. 3 hits.
PROSITEPS51215. AWS. 1 hit.
PS50868. POST_SET. 1 hit.
PS50812. PWWP. 2 hits.
PS50280. SET. 1 hit.
PS01359. ZF_PHD_1. 2 hits.
PS50016. ZF_PHD_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio20881309.
PROF1QA79.

Entry information

Entry nameF1QA79_DANRE
AccessionPrimary (citable) accession number: F1QA79
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 16, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)