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F1QA79

- F1QA79_DANRE

UniProt

F1QA79 - F1QA79_DANRE

Protein
Submitted name:

Uncharacterized protein

Gene

nsd1a

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (03 May 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].SAAS annotation

    GO - Molecular functioni

    1. histone-lysine N-methyltransferase activity Source: InterPro
    2. zinc ion binding Source: InterPro

    Keywords - Molecular functioni

    MethyltransferaseUniRule annotation, Transferase

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:nsd1aImported
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
    ProteomesiUP000000437: Chromosome 14

    Organism-specific databases

    ZFINiZDB-GENE-080519-3. nsd1a.

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-KW

    Keywords - Cellular componenti

    NucleusSAAS annotation

    Expressioni

    Gene expression databases

    BgeeiF1QA79.

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 SET domain.UniRule annotation
    Contains SET domain.SAAS annotation
    Contains post-SET domain.SAAS annotation

    Keywords - Domaini

    Zinc-fingerSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00740000114921.
    KOiK15588.
    TreeFamiTF329088.

    Family and domain databases

    Gene3Di3.30.40.10. 3 hits.
    InterProiIPR006560. AWS.
    IPR003616. Post-SET_dom.
    IPR000313. PWWP_dom.
    IPR001214. SET_dom.
    IPR019786. Zinc_finger_PHD-type_CS.
    IPR011011. Znf_FYVE_PHD.
    IPR001965. Znf_PHD.
    IPR019787. Znf_PHD-finger.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    [Graphical view]
    PfamiPF00628. PHD. 2 hits.
    PF00855. PWWP. 2 hits.
    PF00856. SET. 1 hit.
    [Graphical view]
    SMARTiSM00570. AWS. 1 hit.
    SM00249. PHD. 4 hits.
    SM00508. PostSET. 1 hit.
    SM00293. PWWP. 2 hits.
    SM00184. RING. 2 hits.
    SM00317. SET. 1 hit.
    [Graphical view]
    SUPFAMiSSF57903. SSF57903. 3 hits.
    PROSITEiPS51215. AWS. 1 hit.
    PS50868. POST_SET. 1 hit.
    PS50812. PWWP. 2 hits.
    PS50280. SET. 1 hit.
    PS01359. ZF_PHD_1. 2 hits.
    PS50016. ZF_PHD_2. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F1QA79-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNQSYKVAGR DGSECRGDPQ DSRALDVRIG SCGQQSTKAD QSSAMHFLNP     50
    GYKLSAPFAY NQRESTSNYS PLRRLQDLTT MVNHADGGLQ DKDFHGRNKL 100
    LMHSPIGGNE FGIGLYNTTN SQGNTAIQDL DKNGFSPVSS DSLEHFSPIS 150
    NGFLHFDSTL FDSGDSKDND EDVKGEVATF KDTSKKCQKR NVAKTETQSS 200
    HRLDANKHSS KNTAKSDPPA SPFHVPFTMM EDFDSMDDYS DSDCDLPSTE 250
    NCASIFNLSK RAHSPSDSHS NPSSSPKKKQ LLSVKYSIGD VVWAKFNRRP 300
    WWPCHVTTDP QIDVHTKMKD PSRRPCRLYF VRMFGEIVDQ AWVPAKATFP 350
    FEGGDQFEKL PVLRRRGRQK EKDYKYTVPK RLIPSWKASV LEAEASLTKQ 400
    LNSEPPLTLI QDVCVPITED KAHKKNPACP KSTTLSTPSS SLLSNGLNAS 450
    VKNRLKPGTA SKKKATKKMI QSQSIKLSET PSLFKSKSNP SSDKPSIATD 500
    PLDSPYSDID SVPRILCSKR IDESLQVELE KELSTKTTKV QACKKTSKNS 550
    VDKPGKKTDV KCLKNSKLKK STPKDKTLKA TSSRLKESSS PGSSDGSFAM 600
    HSHYLPASSG LIVRALAAGE ETKEKDLSHE PNSHSPSSEH SSQTNHELSK 650
    QNWEVKNNSE SSEESVDASD SPPNPTSIKR IKKRPQKNGI HKDPPPKSHE 700
    ESESKVNNES MFSDTSSSSI PSPSISPMDA FQDIKELSFR SLVKEECSSG 750
    ESPLRADSNY KFSTFLMLLK DLHDSREKEG KPLTLPPTSP SSLIKEEPSL 800
    IPVGEEPPNE VLCEKEFAEQ SSLPGKTSTP NNSKQSKAKL KSTVKKESQK 850
    PDVVIDSVSP LKKPISPVGL DVLDKSLPLL GDLPKSSDVS AAVTDVCAKG 900
    TISKVAPKKR WKTFESELGK SIKPKSDQVD STLDEVKSVS TEPNGVFKDG 950
    LQESAHSDVP NKKDASENKR LRKPSKRLIE CGEEYEQIFP SKKKTKKSTE 1000
    SCKTGSCISN TTPEQPASDQ ITLDAVSSSS AEKPLDHVVA EEQKPPADVL 1050
    VPPSAPKSPS CATSLETEPC EKKSAPLERK RPRKSVHKVL DCAIEGESVK 1100
    IPKKGESRQH KTNPEESGVR DLEKQEEAGP PPSSPCAVSA QSEGELRTSS 1150
    PIQPDVPSVS QIPVEGEQSS PSKPQINNED SLISEGFAAG LNDSAFSSRD 1200
    SLSGDLSGLS TNKRSVERGG GASLKENVCQ VCEKTGELLL CEGQCCGAFH 1250
    LQCIGLTETP KGRFICQECK MGVHTCFVCK KPDKEVRRCM IPVCGKFYHM 1300
    DCILKYSPTV AQNRGFRCSI HVCLSCYITN PNNPGISKGR LTRCVRCPVA 1350
    YHANDYCMAA GSVPLANNSF LCPNHFTPRK GCKNHEHINV SWCFVCSEGG 1400
    SLLCCESCPA AFHRECLNIE MPQGSWFCND CRAGKKPHYK DILWVKVGRY 1450
    RWWPAEVTQP KSVPENISRM KHEVGEFPVH FFGSKDYVWT YQARCFPYME 1500
    GDANNKEKMG KGADAVYKKA LNEAADRFRE LLKEKEMRQL QEDRKNDKKP 1550
    PPYKHIKVNK QIGKVLIITA DLSEIPRCNC KATDENPCGI DSECINRMLL 1600
    YECHSQVCPA GERCQNQSFT KRQYTEVEIF RTLSRGWGLR SISDIKKGAF 1650
    VNEYVGEVID EEECRSRIKN AQDNDICNFY MLTLDKDRII DAGPKGNESR 1700
    FMNHSCQPNC ETQKWTVNGD TRVGLFALED IPKGVELTFN YNLECLGNGK 1750
    TVCKCGAPNC SGFLGVRPKN QPPSDDKTRK LRRKVSGKRK SQSEVTKERE 1800
    DECFYCGDGG QIVSCKKPGC PKVYHADCLN LSKRPAGRWE CPWHQCNECG 1850
    REAASYCEMC PNSYCEQHRE GMLFISKLDG KLSCSEHDPC GPDPLEPGEI 1900
    REYVPSTSIV GQAPNMSASG RITQPALPPA APLFIPAQNR PAFQSQRDPY 1950
    GDEVVDNILP SSSPKDIKEE DMSDGEVVFE EGEEEEEDLE LVDDEDDEEE 2000
    IDCRGMGLED EEEEEEFEDY EDDFVNVDFV GTEDGDEVEG DEQETSWDEL 2050
    VEAEK 2055
    Length:2,055
    Mass (Da):227,772
    Last modified:May 3, 2011 - v1
    Checksum:iFC5206F7F0DBDA1A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU633762 Genomic DNA. No translation available.
    CU655965 Genomic DNA. No translation available.
    CU659412 Genomic DNA. No translation available.
    RefSeqiXP_683890.4. XM_678798.5.
    UniGeneiDr.83733.

    Genome annotation databases

    EnsembliENSDART00000084114; ENSDARP00000078549; ENSDARG00000060016.
    GeneIDi556086.
    KEGGidre:556086.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU633762 Genomic DNA. No translation available.
    CU655965 Genomic DNA. No translation available.
    CU659412 Genomic DNA. No translation available.
    RefSeqi XP_683890.4. XM_678798.5.
    UniGenei Dr.83733.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSDART00000084114 ; ENSDARP00000078549 ; ENSDARG00000060016 .
    GeneIDi 556086.
    KEGGi dre:556086.

    Organism-specific databases

    CTDi 556086.
    ZFINi ZDB-GENE-080519-3. nsd1a.

    Phylogenomic databases

    GeneTreei ENSGT00740000114921.
    KOi K15588.
    TreeFami TF329088.

    Miscellaneous databases

    NextBioi 20881309.
    PROi F1QA79.

    Gene expression databases

    Bgeei F1QA79.

    Family and domain databases

    Gene3Di 3.30.40.10. 3 hits.
    InterProi IPR006560. AWS.
    IPR003616. Post-SET_dom.
    IPR000313. PWWP_dom.
    IPR001214. SET_dom.
    IPR019786. Zinc_finger_PHD-type_CS.
    IPR011011. Znf_FYVE_PHD.
    IPR001965. Znf_PHD.
    IPR019787. Znf_PHD-finger.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    [Graphical view ]
    Pfami PF00628. PHD. 2 hits.
    PF00855. PWWP. 2 hits.
    PF00856. SET. 1 hit.
    [Graphical view ]
    SMARTi SM00570. AWS. 1 hit.
    SM00249. PHD. 4 hits.
    SM00508. PostSET. 1 hit.
    SM00293. PWWP. 2 hits.
    SM00184. RING. 2 hits.
    SM00317. SET. 1 hit.
    [Graphical view ]
    SUPFAMi SSF57903. SSF57903. 3 hits.
    PROSITEi PS51215. AWS. 1 hit.
    PS50868. POST_SET. 1 hit.
    PS50812. PWWP. 2 hits.
    PS50280. SET. 1 hit.
    PS01359. ZF_PHD_1. 2 hits.
    PS50016. ZF_PHD_2. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: TuebingenImported.
    2. "The zebrafish reference genome sequence and its relationship to the human genome."
      Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
      , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
      Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TuebingenImported.

    Entry informationi

    Entry nameiF1QA79_DANRE
    AccessioniPrimary (citable) accession number: F1QA79
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: May 3, 2011
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3