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Protein
Submitted name:

RELT, TNF receptor

Gene

RELT

Organism
Canis lupus familiaris (Dog) (Canis familiaris)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RELT, TNF receptorImported
Gene namesi
Name:RELTImported
OrganismiCanis lupus familiaris (Dog) (Canis familiaris)Imported
Taxonomic identifieri9615 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis
Proteomesi
  • UP000002254 Componenti: Chromosome 21

Organism-specific databases

VGNCiVGNC:45471 RELT

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei182 – 205HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 43Sequence analysisAdd BLAST43
ChainiPRO_500326766244 – 449Sequence analysisAdd BLAST406

Proteomic databases

PaxDbiF1PVM5

Expressioni

Gene expression databases

BgeeiENSCAFG00000005605

Interactioni

Protein-protein interaction databases

STRINGi9615.ENSCAFP00000008375

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini69 – 109TNFR-CysInterPro annotationAdd BLAST41
Repeati69 – 109TNFR-CysPROSITE-ProRule annotationAdd BLAST41

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili246 – 270Sequence analysisAdd BLAST25

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IKJV Eukaryota
ENOG410YDMP LUCA
GeneTreeiENSGT00530000063385
InParanoidiF1PVM5
OMAiHHLHTVQ
OrthoDBiEOG091G0ADI
TreeFamiTF332339

Family and domain databases

CDDicd13419 TNFRSF19L, 1 hit
InterProiView protein in InterPro
IPR022248 TNF_rcpt_RELT
IPR001368 TNFR/NGFR_Cys_rich_reg
IPR022333 TNFR_19-like
IPR034048 TNFRSF19L_N
PANTHERiPTHR23097:SF37 PTHR23097:SF37, 1 hit
PfamiView protein in Pfam
PF12606 RELT, 1 hit
PF00020 TNFR_c6, 1 hit
PRINTSiPR01970 TNFACTORR19L
SMARTiView protein in SMART
SM00208 TNFR, 1 hit
PROSITEiView protein in PROSITE
PS50050 TNFR_NGFR_2, 1 hit

Sequencei

Sequence statusi: Complete.

F1PVM5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGISFLRLLF QAGDSLGPRM KLSWPHWPLS CLFVLLPWPL ATPISTTPWQ
60 70 80 90 100
CPPGEEPSLD LGQGTLCRSC PPGTFSASWG PGPCQPHSRC SPRGRLEAQP
110 120 130 140 150
GTATQDTLCG DCQPGWFAAS EVTHVPCQLC PWTPLGIRSC YERGRRARRG
160 170 180 190 200
VEVAAGTTGT GDTRQPGNGT RAGGPEETAA QYAVIAIVPV FCLMGLLGIL
210 220 230 240 250
VCNLLKRKGY HCTAHKEVGP GPGGGGSGIN PAYRAEDANE DTIGVLVRLI
260 270 280 290 300
TEKKENAAAL EELLKEYHSK QLVQTSHRPV PRLPPGPPSM PHICPHRHHL
310 320 330 340 350
HTVQGLASLS GPCCSRCSQK KWPEVLLSPE AAAATTPTPR VLPNLARAPK
360 370 380 390 400
AGAKAGRQGE ITILSVGRFR VARIPEQRSS SAASELKTIT EAGPSGGDLP
410 420 430 440
DSPQPGLPTE QRALLGSGGS HTKWLKPPAE NKAEENRYVV RLSESNLVI
Length:449
Mass (Da):47,871
Last modified:October 31, 2012 - v2
Checksum:i160849ECEA8F37E4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEX03012814 Genomic DNA No translation available.
RefSeqiXP_005633589.1, XM_005633532.2

Genome annotation databases

EnsembliENSCAFT00000009030; ENSCAFP00000008375; ENSCAFG00000005605
GeneIDi485200

Similar proteinsi

Entry informationi

Entry nameiF1PVM5_CANLF
AccessioniPrimary (citable) accession number: F1PVM5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: October 31, 2012
Last modified: March 28, 2018
This is version 45 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health