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F1PNE0 (F1PNE0_CANFA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1449 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSCAFP00000001826

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processbrain development

Inferred from electronic annotation. Source: Ensembl

branching involved in ureteric bud morphogenesis

Inferred from electronic annotation. Source: Ensembl

cell differentiation involved in kidney development

Inferred from electronic annotation. Source: Ensembl

cell proliferation involved in metanephros development

Inferred from electronic annotation. Source: Ensembl

cellular response to cholesterol

Inferred from electronic annotation. Source: Ensembl

embryonic limb morphogenesis

Inferred from electronic annotation. Source: Ensembl

epidermis development

Inferred from electronic annotation. Source: Ensembl

glucose homeostasis

Inferred from electronic annotation. Source: Ensembl

heart morphogenesis

Inferred from electronic annotation. Source: Ensembl

hindlimb morphogenesis

Inferred from electronic annotation. Source: Ensembl

keratinocyte proliferation

Inferred from electronic annotation. Source: Ensembl

mammary gland duct morphogenesis

Inferred from electronic annotation. Source: Ensembl

mammary gland epithelial cell differentiation

Inferred from electronic annotation. Source: Ensembl

negative regulation of cell division

Inferred from electronic annotation. Source: Ensembl

negative regulation of epithelial cell proliferation

Inferred from electronic annotation. Source: Ensembl

negative regulation of multicellular organism growth

Inferred from electronic annotation. Source: Ensembl

negative regulation of osteoblast differentiation

Inferred from electronic annotation. Source: Ensembl

negative regulation of sequence-specific DNA binding transcription factor activity

Inferred from electronic annotation. Source: Ensembl

negative regulation of transcription from RNA polymerase II promoter

Inferred from electronic annotation. Source: Ensembl

neural plate axis specification

Inferred from electronic annotation. Source: Ensembl

neural tube closure

Inferred from electronic annotation. Source: Ensembl

pharyngeal system development

Inferred from electronic annotation. Source: Ensembl

positive regulation of cholesterol efflux

Inferred from electronic annotation. Source: Ensembl

protein processing

Inferred from electronic annotation. Source: Ensembl

protein targeting to plasma membrane

Inferred from electronic annotation. Source: Ensembl

regulation of mitotic cell cycle

Inferred from electronic annotation. Source: Ensembl

regulation of protein localization

Inferred from electronic annotation. Source: Ensembl

regulation of smoothened signaling pathway

Inferred from electronic annotation. Source: Ensembl

response to chlorate

Inferred from electronic annotation. Source: Ensembl

smoothened signaling pathway involved in dorsal/ventral neural tube patterning

Inferred from electronic annotation. Source: Ensembl

somite development

Inferred from electronic annotation. Source: Ensembl

spinal cord motor neuron differentiation

Inferred from electronic annotation. Source: Ensembl

   Cellular_componentGolgi apparatus

Inferred from electronic annotation. Source: Ensembl

caveola

Inferred from electronic annotation. Source: Ensembl

integral component of membrane

Inferred from electronic annotation. Source: InterPro

midbody

Inferred from electronic annotation. Source: Ensembl

perinuclear region of cytoplasm

Inferred from electronic annotation. Source: Ensembl

primary cilium

Inferred from electronic annotation. Source: Ensembl

   Molecular_functioncholesterol binding

Inferred from electronic annotation. Source: Ensembl

hedgehog receptor activity

Inferred from electronic annotation. Source: InterPro

heparin binding

Inferred from electronic annotation. Source: Ensembl

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
F1PNE0 [UniParc].

Last modified October 31, 2012. Version 2.
Checksum: F5B9B749D2C82E6F

FASTA1,449160,645
        10         20         30         40         50         60 
MASAGNAAEP QDRGGGGGSG APGRPAGGGR RRRAGGLRRS AALDRDYLHR PSYCDAAFAL 

        70         80         90        100        110        120 
EQISKGKATG RKAPLWLRAK FQRLLFKLGC YIQKNCGKFL VVGLLIFGAF AVGLKAANLE 

       130        140        150        160        170        180 
TNVEELWVEV GGRVSRELNY TRQKIGEEAM FNPQLMIQTP KEEGANVLTT EALRQHLDSA 

       190        200        210        220        230        240 
LQASRVHVYM YNRQWKLEHL CYKSGELITE TGYMDQIIEY LYPCLIITPL DCFWEGAKLQ 

       250        260        270        280        290        300 
SGTAYLLGKP PLQWTNFDPL EFLEELKKIN YQVDSWEEML NKAEVGHGYM DRPCLNPADP 

       310        320        330        340        350        360 
DCPATAPNKN ATKPLDVALV LNGGCHGLSR KYMHWQEELI VGGTVKNSTG KLVSAHALQT 

       370        380        390        400        410        420 
MFQLMTPKQM YEHFKGYEYV SHINWNEDKA AAILEAWQRT YVEVVHQSVA PNSTQKVLSF 

       430        440        450        460        470        480 
TTTTLDDILK SFSDVSVIRV ASGYLLMLAY ACLTMLRWDC SKSQGAVGLA GVLLVALSVA 

       490        500        510        520        530        540 
AGLGLCSLIG ISFNAATTQV LPFLALGVGV DDVFLLAHAF SETGQNKRIP FEDRTGECLK 

       550        560        570        580        590        600 
RTGASVALTS ISNVTAFFMA ALIPIPALRA FSLQAAVVVV FNFAMVLLIF PAILSMDLYR 

       610        620        630        640        650        660 
REDRRLDIFC CFTSPCVSRV IQVEPQAYTE THDNTRYSPP PPYSSHSFTH ETQITMQSTV 

       670        680        690        700        710        720 
QLRTEYDPHT HVYYTTAEPR SEISVQPVTM TQDTLSCQSP ESTSSTRDLL SQFSDSSLHC 

       730        740        750        760        770        780 
LEPPCTKWTL SSFAEKHYAP FLLKPKAKVV VIFLFLGLLG VSLYGTTRVR DGLDLTDIVP 

       790        800        810        820        830        840 
RETREYDFIA AQFKYFSFYN MYIVTQKADY PNIQHLLYDL HKSFSNVKYV MLEENKQLPK 

       850        860        870        880        890        900 
MWLHYFRDWL QGLQDAFDSD WETGKSCNKF KKGSDDGVLA YKLLVQTGSR DKPIDISQLT 

       910        920        930        940        950        960 
KQRLVDAHGI INPSAFYIYL TAWVSNDPVA YAASQANIRP HRPEWVHDKA DYMPETRLRI 

       970        980        990       1000       1010       1020 
PAAEPIEYAQ FPFYLNGLRD TSDFVEAIEK VRSICNNYTS LGLSSYPNGY PFLFWEQYIG 

      1030       1040       1050       1060       1070       1080 
LRHWLLLSVS VVLACTFLVC AVFLLNPWTA GIIVTVLALM TVELFGMMGL IGIKLSAVPV 

      1090       1100       1110       1120       1130       1140 
VILIASVGIG VEFTVHVALA FLTAIGDKNR RAVLALEHMF APVLDGAVST LLGVLMLAGS 

      1150       1160       1170       1180       1190       1200 
EFDFIVRYFF AVLAILTILG VLNGLVLLPV LLSFFGPYPE VSPANGLNRL PTPSPEPPPS 

      1210       1220       1230       1240       1250       1260 
VVRFAVPPSH ANNGSDSSDS EYSSQTTVSG ISEELRHYEA QQGTRGPAHQ VIVEATENPV 

      1270       1280       1290       1300       1310       1320 
FARSTVVHPE ARHHPPSNPR QQPPLDSEPL PPGRPGQQPR REPPREGLRP PPYRPRRDAF 

      1330       1340       1350       1360       1370       1380 
EISTDGHPGP GSRDRAGPRG ARSNNPRHPV FTAMGSSAPS YCQPITTVTA SASVTVAVHP 

      1390       1400       1410       1420       1430       1440 
PPAPGPGSAW NPRGGLCPGY GDCPETDHRL FEDPHVPFNV RCERRDSKVE VIELQDVECE 


ERPRGGSSN 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence, comparative analysis and haplotype structure of the domestic dog."
Broad Sequencing Platform
Lindblad-Toh K., Wade C.M., Mikkelsen T.S., Karlsson E.K., Jaffe D.B., Kamal M., Clamp M., Chang J.L., Kulbokas E.J. III, Zody M.C., Mauceli E., Xie X., Breen M., Wayne R.K., Ostrander E.A., Ponting C.P., Galibert F., Smith D.R. expand/collapse author list , deJong P.J., Kirkness E.F., Alvarez P., Biagi T., Brockman W., Butler J., Chin C.-W., Cook A., Cuff J., Daly M.J., DeCaprio D., Gnerre S., Grabherr M., Kellis M., Kleber M., Bardeleben C., Goodstadt L., Heger A., Hitte C., Kim L., Koepfli K.-P., Parker H.G., Pollinger J.P., Searle S.M.J., Sutter N.B., Thomas R., Webber C., Baldwin J., Abebe A., Abouelleil A., Aftuck L., Ait-Zahra M., Aldredge T., Allen N., An P., Anderson S., Antoine C., Arachchi H., Aslam A., Ayotte L., Bachantsang P., Barry A., Bayul T., Benamara M., Berlin A., Bessette D., Blitshteyn B., Bloom T., Blye J., Boguslavskiy L., Bonnet C., Boukhgalter B., Brown A., Cahill P., Calixte N., Camarata J., Cheshatsang Y., Chu J., Citroen M., Collymore A., Cooke P., Dawoe T., Daza R., Decktor K., DeGray S., Dhargay N., Dooley K., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., Dupes A., Egbiremolen O., Elong R., Falk J., Farina A., Faro S., Ferguson D., Ferreira P., Fisher S., FitzGerald M., Foley K., Foley C., Franke A., Friedrich D., Gage D., Garber M., Gearin G., Giannoukos G., Goode T., Goyette A., Graham J., Grandbois E., Gyaltsen K., Hafez N., Hagopian D., Hagos B., Hall J., Healy C., Hegarty R., Honan T., Horn A., Houde N., Hughes L., Hunnicutt L., Husby M., Jester B., Jones C., Kamat A., Kanga B., Kells C., Khazanovich D., Kieu A.C., Kisner P., Kumar M., Lance K., Landers T., Lara M., Lee W., Leger J.-P., Lennon N., Leuper L., LeVine S., Liu J., Liu X., Lokyitsang Y., Lokyitsang T., Lui A., Macdonald J., Major J., Marabella R., Maru K., Matthews C., McDonough S., Mehta T., Meldrim J., Melnikov A., Meneus L., Mihalev A., Mihova T., Miller K., Mittelman R., Mlenga V., Mulrain L., Munson G., Navidi A., Naylor J., Nguyen T., Nguyen N., Nguyen C., Nguyen T., Nicol R., Norbu N., Norbu C., Novod N., Nyima T., Olandt P., O'Neill B., O'Neill K., Osman S., Oyono L., Patti C., Perrin D., Phunkhang P., Pierre F., Priest M., Rachupka A., Raghuraman S., Rameau R., Ray V., Raymond C., Rege F., Rise C., Rogers J., Rogov P., Sahalie J., Settipalli S., Sharpe T., Shea T., Sheehan M., Sherpa N., Shi J., Shih D., Sloan J., Smith C., Sparrow T., Stalker J., Stange-Thomann N., Stavropoulos S., Stone C., Stone S., Sykes S., Tchuinga P., Tenzing P., Tesfaye S., Thoulutsang D., Thoulutsang Y., Topham K., Topping I., Tsamla T., Vassiliev H., Venkataraman V., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J., Wilson A., Yadav S., Yang S., Yang X., Young G., Yu Q., Zainoun J., Zembek L., Zimmer A., Lander E.S.
Nature 438:803-819(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Boxer Ensembl ENSCAFP00000001826.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Boxer Ensembl ENSCAFP00000001826.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAEX03000490 Genomic DNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSCAFT00000001978; ENSCAFP00000001826; ENSCAFG00000001246.

Phylogenomic databases

GeneTreeENSGT00680000099777.
OMAPDRDYLH.
OrthoDBEOG7HMS06.
TreeFamTF106489.

Family and domain databases

InterProIPR003392. Patched.
IPR000731. SSD.
IPR004766. TM_rcpt_patched.
[Graphical view]
PfamPF02460. Patched. 1 hit.
[Graphical view]
TIGRFAMsTIGR00918. 2A060602. 1 hit.
PROSITEPS50156. SSD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1PNE0_CANFA
AccessionPrimary (citable) accession number: F1PNE0
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: October 31, 2012
Last modified: February 19, 2014
This is version 16 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)