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F1PKX3 (F1PKX3_CANFA) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length733 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSCAFP00000013985

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3161 By similarity PIRSR PIRSR000459-1
Active site3751 By similarity PIRSR PIRSR000459-1
Active site3981 By similarity PIRSR PIRSR000459-1
Metal binding4381Calcium By similarity PIRSR PIRSR000459-2
Metal binding4401Calcium By similarity PIRSR PIRSR000459-2
Metal binding4871Calcium By similarity PIRSR PIRSR000459-2
Metal binding4921Calcium By similarity PIRSR PIRSR000459-2

Sequences

Sequence LengthMass (Da)Tools
F1PKX3 [UniParc].

Last modified October 31, 2012. Version 2.
Checksum: 2DC58958026EF078

FASTA73383,388
        10         20         30         40         50         60 
MSETSGPAFG GRRALPRNAS NAAEDDLPTV ELQGGPVPRG VNLQDYLHVT NIHLFKERWD 

        70         80         90        100        110        120 
TNKVDHHTDK YENNKLIVRR GQSFFIQIDF NRPYDPRRDL FRVEYVIGRY PQENKGTYIP 

       130        140        150        160        170        180 
VPIVPELQRG KWGAKVIMRE NRSVRLSIQS SPECIVGKFR MYVAVWTPYG ILRTSRNPET 

       190        200        210        220        230        240 
DTYILFNPWC EEDAVYLDGD KEREEYVLND IGVIFYGDFN DIKSRSWSYG QFEDGILDAC 

       250        260        270        280        290        300 
LYVMDKAQMD LSGRGNPIKV SRVGSAMVNA KDDEGVLVGS WDNIYAYGVP PSAWTGSVDI 

       310        320        330        340        350        360 
LLEYQSTKSP VRYGQCWVFA GVFNTFLRCL GIPARVITNY FSAHDNDANL QMDIFLEEDG 

       370        380        390        400        410        420 
NVNSKLTKDS VWNYHCWNEA WMTRPDLPVG FGGWQAVDST PQENSDGMYR CGPASVQAIK 

       430        440        450        460        470        480 
HGHICFQFDA PFVFAEVNSD LIYITAKKDG THVVETVDTT HIGKLIVTKE VGGDGIKDIT 

       490        500        510        520        530        540 
DTYKFQEGQE EERLALETAL MYGAKKPLNI EGILKPRSDV DMNFDVENAV LGRDFKLTIT 

       550        560        570        580        590        600 
FQNNSPRRYT LLAYLSGNIV FYTGVSKTEF KKETFEVTLE PLSFKREEVL IRAGEYMGQL 

       610        620        630        640        650        660 
LEQAYLHFFV TARVNESKDI LAKQKSTVLT IPQLIIKVRG AKMVGSDMVV TVEFTNPLKE 

       670        680        690        700        710        720 
TLRNVWIHLD GPGVIKPMRK MFREIQPSAT IQWEEVCRPW VSGPRKLIAS MTSDSLRHVY 

       730 
GELNLQIQRR PSA

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence, comparative analysis and haplotype structure of the domestic dog."
Broad Sequencing Platform
Lindblad-Toh K., Wade C.M., Mikkelsen T.S., Karlsson E.K., Jaffe D.B., Kamal M., Clamp M., Chang J.L., Kulbokas E.J. III, Zody M.C., Mauceli E., Xie X., Breen M., Wayne R.K., Ostrander E.A., Ponting C.P., Galibert F., Smith D.R. expand/collapse author list , deJong P.J., Kirkness E.F., Alvarez P., Biagi T., Brockman W., Butler J., Chin C.-W., Cook A., Cuff J., Daly M.J., DeCaprio D., Gnerre S., Grabherr M., Kellis M., Kleber M., Bardeleben C., Goodstadt L., Heger A., Hitte C., Kim L., Koepfli K.-P., Parker H.G., Pollinger J.P., Searle S.M.J., Sutter N.B., Thomas R., Webber C., Baldwin J., Abebe A., Abouelleil A., Aftuck L., Ait-Zahra M., Aldredge T., Allen N., An P., Anderson S., Antoine C., Arachchi H., Aslam A., Ayotte L., Bachantsang P., Barry A., Bayul T., Benamara M., Berlin A., Bessette D., Blitshteyn B., Bloom T., Blye J., Boguslavskiy L., Bonnet C., Boukhgalter B., Brown A., Cahill P., Calixte N., Camarata J., Cheshatsang Y., Chu J., Citroen M., Collymore A., Cooke P., Dawoe T., Daza R., Decktor K., DeGray S., Dhargay N., Dooley K., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., Dupes A., Egbiremolen O., Elong R., Falk J., Farina A., Faro S., Ferguson D., Ferreira P., Fisher S., FitzGerald M., Foley K., Foley C., Franke A., Friedrich D., Gage D., Garber M., Gearin G., Giannoukos G., Goode T., Goyette A., Graham J., Grandbois E., Gyaltsen K., Hafez N., Hagopian D., Hagos B., Hall J., Healy C., Hegarty R., Honan T., Horn A., Houde N., Hughes L., Hunnicutt L., Husby M., Jester B., Jones C., Kamat A., Kanga B., Kells C., Khazanovich D., Kieu A.C., Kisner P., Kumar M., Lance K., Landers T., Lara M., Lee W., Leger J.-P., Lennon N., Leuper L., LeVine S., Liu J., Liu X., Lokyitsang Y., Lokyitsang T., Lui A., Macdonald J., Major J., Marabella R., Maru K., Matthews C., McDonough S., Mehta T., Meldrim J., Melnikov A., Meneus L., Mihalev A., Mihova T., Miller K., Mittelman R., Mlenga V., Mulrain L., Munson G., Navidi A., Naylor J., Nguyen T., Nguyen N., Nguyen C., Nguyen T., Nicol R., Norbu N., Norbu C., Novod N., Nyima T., Olandt P., O'Neill B., O'Neill K., Osman S., Oyono L., Patti C., Perrin D., Phunkhang P., Pierre F., Priest M., Rachupka A., Raghuraman S., Rameau R., Ray V., Raymond C., Rege F., Rise C., Rogers J., Rogov P., Sahalie J., Settipalli S., Sharpe T., Shea T., Sheehan M., Sherpa N., Shi J., Shih D., Sloan J., Smith C., Sparrow T., Stalker J., Stange-Thomann N., Stavropoulos S., Stone C., Stone S., Sykes S., Tchuinga P., Tenzing P., Tesfaye S., Thoulutsang D., Thoulutsang Y., Topham K., Topping I., Tsamla T., Vassiliev H., Venkataraman V., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J., Wilson A., Yadav S., Yang S., Yang X., Young G., Yu Q., Zainoun J., Zembek L., Zimmer A., Lander E.S.
Nature 438:803-819(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Boxer Ensembl ENSCAFP00000013985.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Boxer Ensembl ENSCAFP00000013985.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AAEX03017502 Genomic DNA. No translation available.
AAEX03017503 Genomic DNA. No translation available.
AAEX03017504 Genomic DNA. No translation available.
AAEX03017505 Genomic DNA. No translation available.
RefSeqXP_535876.2. XM_535876.3.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSCAFT00000015113; ENSCAFP00000013985; ENSCAFG00000009509.
GeneID478711.
KEGGcfa:478711.

Organism-specific databases

CTD2162.

Phylogenomic databases

GeneTreeENSGT00690000101887.
KOK03917.
OMAGTHVVEA.

Family and domain databases

Gene3D2.60.40.10. 3 hits.
InterProIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERPTHR11590. PTHR11590. 1 hit.
PfamPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFPIRSF000459. TGM_EBP42. 1 hit.
SMARTSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMSSF81296. Ig_E-set. 1 hit.
SSF49309. Transglut_C. 2 hits.
PROSITEPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1PKX3_CANFA
AccessionPrimary (citable) accession number: F1PKX3
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: October 31, 2012
Last modified: March 6, 2013
This is version 16 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info