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Protein
Submitted name:

Syntaxin 1B

Gene

STX1B

Organism
Canis lupus familiaris (Dog) (Canis familiaris)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-CFA-5682910. LGI-ADAM interactions.

Names & Taxonomyi

Protein namesi
Submitted name:
Syntaxin 1BImported
Gene namesi
Name:STX1BImported
OrganismiCanis lupus familiaris (Dog) (Canis familiaris)Imported
Taxonomic identifieri9615 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis
Proteomesi
  • UP000002254 Componenti: Chromosome 6

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei256 – 277HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiF1PGE7.

Expressioni

Gene expression databases

BgeeiENSCAFG00000016780.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9615.ENSCAFP00000024672.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini182 – 244T-SNARE coiled-coil homologyInterPro annotationAdd BLAST63

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili27 – 54Sequence analysisAdd BLAST28
Coiled coili58 – 96Sequence analysisAdd BLAST39

Sequence similaritiesi

Belongs to the syntaxin family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0810. Eukaryota.
COG5074. LUCA.
GeneTreeiENSGT00760000119200.
InParanoidiF1PGE7.
OMAiGEHPDEE.
OrthoDBiEOG091G0EUK.
TreeFamiTF313763.

Family and domain databases

InterProiView protein in InterPro
IPR010989. SNARE.
IPR037016. STX1B.
IPR006012. Syntaxin/epimorphin_CS.
IPR006011. Syntaxin_N.
IPR000727. T_SNARE_dom.
PANTHERiPTHR19957:SF76. PTHR19957:SF76. 1 hit.
PfamiView protein in Pfam
PF05739. SNARE. 1 hit.
PF00804. Syntaxin. 1 hit.
SMARTiView protein in SMART
SM00503. SynN. 1 hit.
SM00397. t_SNARE. 1 hit.
SUPFAMiSSF47661. SSF47661. 1 hit.
PROSITEiView protein in PROSITE
PS00914. SYNTAXIN. 1 hit.
PS50192. T_SNARE. 1 hit.

Sequencei

Sequence statusi: Complete.

F1PGE7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QAKDSDDEEE VVHVDRDHFM DEFFEQVEEI RGCIEKLSED VEQVKKQHSA
60 70 80 90 100
ILAAPNPDEK TKQELEDLTA DIKKTANKVR SKLKAIEQSI EQEEGLNRSS
110 120 130 140 150
ADLRIRKTQH STLSRKFVEV MTEYNATQSK YRDRCKDRIQ RQLEITGRTT
160 170 180 190 200
TNEELEDMLE SGKLAIFTDD IKMDSQMTKQ ALNEIETRHN EIIKLETSIR
210 220 230 240 250
ELHDMFVDMA MLVESQGEMI DRIEYNVEHS VDYVERAVSD TKKAVKYQSK
260 270
ARRKKIMIII CCVVLGVVLA SSIGGTLGL
Length:279
Mass (Da):32,127
Last modified:October 31, 2012 - v2
Checksum:iBA79AE090E1D7797
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEX03004381 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSCAFT00000026565; ENSCAFP00000024672; ENSCAFG00000016780.

Similar proteinsi

Entry informationi

Entry nameiF1PGE7_CANLF
AccessioniPrimary (citable) accession number: F1PGE7
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: October 31, 2012
Last modified: October 25, 2017
This is version 46 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported