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F1P459

- F1P459_CHICK

UniProt

F1P459 - F1P459_CHICK

Protein
Submitted name:

Uncharacterized protein

Gene

NEU4

Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 2 (26 Jun 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. exo-alpha-sialidase activity Source: Ensembl

    GO - Biological processi

    1. ganglioside catabolic process Source: Ensembl
    2. glycoprotein catabolic process Source: Ensembl
    3. oligosaccharide catabolic process Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:NEU4Imported
    OrganismiGallus gallus (Chicken)Imported
    Taxonomic identifieri9031 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus
    ProteomesiUP000000539: Chromosome 9

    Subcellular locationi

    GO - Cellular componenti

    1. lysosome Source: Ensembl
    2. mitochondrion Source: Ensembl
    3. organelle inner membrane Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000011171.
    KOiK12357.
    OrthoDBiEOG7MSMNP.
    TreeFamiTF331063.

    Family and domain databases

    Gene3Di2.120.10.10. 2 hits.
    InterProiIPR026946. Sialidase-4.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view]
    PANTHERiPTHR10628. PTHR10628. 1 hit.
    PTHR10628:SF8. PTHR10628:SF8. 1 hit.
    SUPFAMiSSF50939. SSF50939. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    F1P459-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQQRKGQMGS HSSAQRTRMG TALPPPFPIP ALASLVLQKP LQLAAWRTAF    50
    SFLLAAPHLP PPLSPDPTSV WAVPLSPAGT MGSRHFPART VLFEKESTGV 100
    TYRVPALIYL PCVAKLLAFA EERLSADDAH ANLLVLRRGT VYGSYVEWED 150
    MRVLETAALQ HHRSMNPCPL YDEFTGTLFL FFITVLGRTP EAFQIVTGQN 200
    VTRLCCVTSA DQGLSWSKAT DLTQQVIGRA IKEWATFALG PGHGIQLRSG 250
    RLLVPAYSYH IDCKECFGQL CKTTPHSFAF YSDDHGQGWR FGEFIPNLQT 300
    GECQLVSVDE EDGSNVLYCN ARSSLGFRVQ ALSTDDGAVF HGGQLVPRLV 350
    EPPHGCHGSI IGFPAPLVYG PQPRSAPHVL PATVAGSRTS TGPRSWASFH 400
    GDPKGTSGPF FQAPTWVLYS HPTSSMSRVN MGVHLSTFPR DADSWTEPWV 450
    IYEGPSAYSD LAYMELPHSQ FPVSGGPAIA FACLYENGKR SPYEQISFSM 500
    FTLHDVLQNI PLTAAVPRRK RRRKSCCVS 529
    Length:529
    Mass (Da):58,048
    Last modified:June 26, 2013 - v2
    Checksum:i062EA1C2B615ABBD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AADN03005846 Genomic DNA. No translation available.
    RefSeqiXP_003641780.2. XM_003641732.2.

    Genome annotation databases

    EnsembliENSGALT00000010282; ENSGALP00000010268; ENSGALG00000006361.
    GeneIDi429131.
    KEGGigga:429131.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AADN03005846 Genomic DNA. No translation available.
    RefSeqi XP_003641780.2. XM_003641732.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSGALT00000010282 ; ENSGALP00000010268 ; ENSGALG00000006361 .
    GeneIDi 429131.
    KEGGi gga:429131.

    Organism-specific databases

    CTDi 129807.

    Phylogenomic databases

    GeneTreei ENSGT00390000011171.
    KOi K12357.
    OrthoDBi EOG7MSMNP.
    TreeFami TF331063.

    Family and domain databases

    Gene3Di 2.120.10.10. 2 hits.
    InterProi IPR026946. Sialidase-4.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view ]
    PANTHERi PTHR10628. PTHR10628. 1 hit.
    PTHR10628:SF8. PTHR10628:SF8. 1 hit.
    SUPFAMi SSF50939. SSF50939. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
      International Chicken Genome Sequencing Consortium
      Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A.
      , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
      Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Red jungle fowlImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Red jungle fowlImported.

    Entry informationi

    Entry nameiF1P459_CHICK
    AccessioniPrimary (citable) accession number: F1P459
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: June 26, 2013
    Last modified: October 1, 2014
    This is version 23 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3