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F1NYM0 (F1NYM0_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length1281 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Sequences

Sequence LengthMass (Da)Tools
F1NYM0 [UniParc].

Last modified June 26, 2013. Version 2.
Checksum: 8D601B3C85D0A709

FASTA1,281147,239
        10         20         30         40         50         60 
MPAALGLLLP WLSLVGALQP GLEPPQSDPT EAGAVFFASE YNSTAEIVLF RSVSASWEYN 

        70         80         90        100        110        120 
TNLTTANAAL QVEASLEEQN FTELWGKKAK ELYGNIWSNF SDPQLKKIIG SIQTLGPSNL 

       130        140        150        160        170        180 
PLDKRQQYNT ILSDMDKIYS TAKVCLDNGT CWDLEPDISD IMATSRSYKK LLYAWEGWHN 

       190        200        210        220        230        240 
AAGNPLRAKY QEFVTLSNEA YQMDGFEDTG SYWRSWYDST TFEDDLEHLY NQLEPLYLNL 

       250        260        270        280        290        300 
HAFVRRKLYD RYGPKYINLK GPIPAHLLGN MWAQQWNNIY DLMVPYPDKP NLDVTNTMVN 

       310        320        330        340        350        360 
QGWNATHMFR VSEEFFTSLG LLEMPPEFWE KSMLEKPADG REVVCHASAW DFYNRKDFRI 

       370        380        390        400        410        420 
KQCTTVTMEQ LFTVHHEMGH VQYYLQYKDQ PVSFRGGANP GFHEAIGDVL SLSVSTPSHL 

       430        440        450        460        470        480 
QKIGLLSSAV EDEESNINYL LKMALEKIAF LPFGYLIDQW RWNVFSGRTP PSRYNYDWWY 

       490        500        510        520        530        540 
LRTKYQGICA PVSRNESNFD PGAKYHIPGN TPYIRYFVSF ILQFQFHKAL CQAANHTGPL 

       550        560        570        580        590        600 
HTCDIYMSKE AGAKLREVLK AGSSKSWQEI LFNLTGTDKM DAGALLEYFS PVTTWLQEQN 

       610        620        630        640        650        660 
NKTNEVLGWP EFDWRPPIPE GYPEGIDKIV DEAQAKEFLS EYNSTAEVVW NAYTEASWEY 

       670        680        690        700        710        720 
NTNITDHNKE VMLEKNLAMS KHTIEYGMRA RQFDPSDFQD ETVTRILNKL SVLERAALPE 

       730        740        750        760        770        780 
DELKEYNTLL SDMETTYSVA KVCRENNTCH PLDPDLTDIL ATSRDYNELL FAWKGWRDAS 

       790        800        810        820        830        840 
GAKIKDKYKR YVELSNKAAV LNGYTDNGAY WRSLYETPTF EEDLERLYLQ LQPLYLNLHA 

       850        860        870        880        890        900 
YVRRALYNKY GAEHISLKGP IPAHLLGNMW AQSWSNIFDL VMPFPDATKV DATPAMKQQG 

       910        920        930        940        950        960 
WTPKMMFEES DRFFTSLGLI PMPQEFWDKS MIEKPADGRE VVCHASAWDF YNRKDFRIKQ 

       970        980        990       1000       1010       1020 
CTVVNMDDLI TVHHEMGHVQ YFLQYMDQPI SFRDGANPGF HEAIGDVMAL SVSTPKHLHS 

      1030       1040       1050       1060       1070       1080 
INLLDQVTEN EESDINYLMS IALDKIAFLP FGYLMDQWRW KVFDGRIKED EYNQQWWNLR 

      1090       1100       1110       1120       1130       1140 
LKYQGLCPPV PRSEDDFDPG AKFHIPANVP YIRYFVSFVI QFQFHQALCK AAGHTGPLHT 

      1150       1160       1170       1180       1190       1200 
CDIYQSKEAG KLLGDAMKLG FSKPWPEAMQ LITGQPNMSA EALMSYFEPL MTWLVKKNTE 

      1210       1220       1230       1240       1250       1260 
NGEVLGWPEY SWTPYAVTEF HAATDTADFL GMSVGTKQAT AGAWVLLALA LVFLITSIFL 

      1270       1280 
GVKLFSSRRK AFKSSSEMEL K 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000039731.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000039731.
[3]Peng J., Zhang H.
Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AADN03008747 Genomic DNA. No translation available.
AADN03008812 Genomic DNA. No translation available.
JX218994 mRNA. Translation: AFP83450.1.
RefSeqNP_001161204.1. NM_001167732.1.
UniGeneGga.3781.

3D structure databases

ProteinModelPortalF1NYM0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000040528; ENSGALP00000039731; ENSGALG00000000498.
GeneID419953.
KEGGgga:419953.

Organism-specific databases

CTD1636.

Phylogenomic databases

GeneTreeENSGT00520000055576.
KOK01283.
OrthoDBEOG76HQ13.
TreeFamTF312861.

Family and domain databases

InterProIPR001548. Peptidase_M2.
[Graphical view]
PANTHERPTHR10514. PTHR10514. 1 hit.
PfamPF01401. Peptidase_M2. 2 hits.
[Graphical view]
PRINTSPR00791. PEPDIPTASEA.
ProtoNetSearch...

Entry information

Entry nameF1NYM0_CHICK
AccessionPrimary (citable) accession number: F1NYM0
Secondary accession number(s): J7GZN9
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: June 26, 2013
Last modified: July 9, 2014
This is version 20 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)