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F1NV79 (F1NV79_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length722 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. RuleBase RU004542

Subcellular location

Nucleus By similarity.

Sequence similarities

Contains 1 pre-SET domain.

Contains 2 SET domains. RuleBase RU004538

Contains SET domain. SAAS SAAS001214

Contains pre-SET domain. SAAS SAAS001214

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSGALP00000027418

Sequences

Sequence LengthMass (Da)Tools
F1NV79 [UniParc].

Last modified June 26, 2013. Version 2.
Checksum: 1457B8DBD4DB29C2

FASTA72281,381
        10         20         30         40         50         60 
MEGNRMLRDC PEEKNRITSR KETAEGDLKA FWTQLESRRV DLIFEQVQEV LLLLKEKIKN 

        70         80         90        100        110        120 
GTATNQECWQ AWALVNEADL GDLLTLTNVN DVLDGEDIQE PKPKSQRVVT DDSSGNSVEG 

       130        140        150        160        170        180 
SHSKKEKIEK SDSESEEASS EIQRVPLNPR YRIHKCSSAC LSNRAVSSYK GENPLKIPIL 

       190        200        210        220        230        240 
FHFQRRHAKA DCLSKSLDVH YKAPCGRSLR SFQDVQSYLF ETKCDFLFID HFSFNTYVLL 

       250        260        270        280        290        300 
GRNTVNPEPL VFDLDISNGA ESVPISFCND IDRARLPYFK YRRASWPRGY YLNNLSSTFL 

       310        320        330        340        350        360 
DSCDCTDGCI DRSKCACLQL TARGCRKVSV SPNAKMSRGY SYKRLEGPVP SGIYECSVSC 

       370        380        390        400        410        420 
RCDKMMCQNR VVQHGIQVRL QVFNTEKKGW GVRCLDDIDK GTFVCTYSGR LMSRAEVQEL 

       430        440        450        460        470        480 
GGADQDLKEE SAVNDRGQSF FSKKRKLDSS CSDSEIELVL TGKDDILEHQ QSAVNENDST 

       490        500        510        520        530        540 
PIHPRNLNTA ATRRLGTRIA VVDNHQLKME VDTLVHSAGS DEDNSSQPQQ SSETELTSGT 

       550        560        570        580        590        600 
NKERSSQKQR VEDLVEVGQT EPAEMDSAEC RRKSLSLKGV ACGRSDVLND KYVVKPSTKV 

       610        620        630        640        650        660 
LQKADCVEEA HRQAKQGIFC VEADGDRTLL KNANNENIYI LDATKEGNVG RFLNHSCCPN 

       670        680        690        700        710        720 
LFAQSVFVET HNRSFPWVAF FTNRHVRAGT ELTWDYGYEA GSMPETEISC WCGVQKCRKK 


TL 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000027418.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000027418.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AADN03001235 Genomic DNA. No translation available.
RefSeqXP_417061.2. XM_417061.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000027470; ENSGALP00000027418; ENSGALG00000017006.
GeneID418866.
KEGGgga:418866.

Organism-specific databases

CTD83852.

Phylogenomic databases

GeneTreeENSGT00750000117355.
KOK11421.
OrthoDBEOG7ZD1TG.

Family and domain databases

Gene3D3.30.890.10. 1 hit.
InterProIPR016177. DNA-bd_dom.
IPR001739. Methyl_CpG_DNA-bd.
IPR007728. Pre-SET_dom.
IPR001214. SET_dom.
[Graphical view]
PfamPF01429. MBD. 1 hit.
PF05033. Pre-SET. 1 hit.
PF00856. SET. 2 hits.
[Graphical view]
SMARTSM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF54171. SSF54171. 1 hit.
PROSITEPS50982. MBD. 1 hit.
PS50867. PRE_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1NV79_CHICK
AccessionPrimary (citable) accession number: F1NV79
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: June 26, 2013
Last modified: June 11, 2014
This is version 24 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)