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Protein
Submitted name:

SET domain bifurcated 2

Gene

SETDB2

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
SET domain bifurcated 2Imported
Gene namesi
Name:SETDB2Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiF1NV79.

Expressioni

Gene expression databases

BgeeiENSGALG00000017006.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini167 – 239MBDInterPro annotationAdd BLAST73
Domaini301 – 375Pre-SETInterPro annotationAdd BLAST75
Domaini378 – 697SETInterPro annotationAdd BLAST320

Phylogenomic databases

GeneTreeiENSGT00780000121845.
OMAiKCHFQRR.
OrthoDBiEOG091G014F.

Family and domain databases

InterProiView protein in InterPro
IPR016177. DNA-bd_dom_sf.
IPR001739. Methyl_CpG_DNA-bd.
IPR007728. Pre-SET_dom.
IPR001214. SET_dom.
PfamiView protein in Pfam
PF01429. MBD. 1 hit.
PF05033. Pre-SET. 1 hit.
PF00856. SET. 1 hit.
SMARTiView protein in SMART
SM00391. MBD. 1 hit.
SM00468. PreSET. 1 hit.
SM00317. SET. 1 hit.
SUPFAMiSSF54171. SSF54171. 1 hit.
PROSITEiView protein in PROSITE
PS50982. MBD. 1 hit.
PS50867. PRE_SET. 1 hit.
PS50280. SET. 1 hit.

Sequencei

Sequence statusi: Complete.

F1NV79-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGNRMLRDC PEEKNRITSR KETAEGDLKA FWTQLESRRV DLIFEQVQEV
60 70 80 90 100
LLLLKEKIKN GTATNQECWQ AWALVNEADL GDLLTLTNVN DVLDGEDIQE
110 120 130 140 150
PKPKSQRVVT DDSSGNSVEG SHSKKEKIEK SDSESEEASS EIQRVPLNPR
160 170 180 190 200
YRIHKCSSAC LSNRAVSSYK GENPLKIPIL FHFQRRHAKA DCLSKSLDVH
210 220 230 240 250
YKAPCGRSLR SFQDVQSYLF ETKCDFLFID HFSFNTYVLL GRNTVNPEPL
260 270 280 290 300
VFDLDISNGA ESVPISFCND IDRARLPYFK YRRASWPRGY YLNNLSSTFL
310 320 330 340 350
DSCDCTDGCI DRSKCACLQL TARGCRKVSV SPNAKMSRGY SYKRLEGPVP
360 370 380 390 400
SGIYECSVSC RCDKMMCQNR VVQHGIQVRL QVFNTEKKGW GVRCLDDIDK
410 420 430 440 450
GTFVCTYSGR LMSRAEVQEL GGADQDLKEE SAVNDRGQSF FSKKRKLDSS
460 470 480 490 500
CSDSEIELVL TGKDDILEHQ QSAVNENDST PIHPRNLNTA ATRRLGTRIA
510 520 530 540 550
VVDNHQLKME VDTLVHSAGS DEDNSSQPQQ SSETELTSGT NKERSSQKQR
560 570 580 590 600
VEDLVEVGQT EPAEMDSAEC RRKSLSLKGV ACGRSDVLND KYVVKPSTKV
610 620 630 640 650
LQKADCVEEA HRQAKQGIFC VEADGDRTLL KNANNENIYI LDATKEGNVG
660 670 680 690 700
RFLNHSCCPN LFAQSVFVET HNRSFPWVAF FTNRHVRAGT ELTWDYGYEA
710 720
GSMPETEISC WCGVQKCRKK TL
Length:722
Mass (Da):81,381
Last modified:February 15, 2017 - v4
Checksum:i1457B8DBD4DB29C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000118 Genomic DNA. No translation available.
RefSeqiXP_417061.2. XM_417061.4.

Genome annotation databases

EnsembliENSGALT00000027470; ENSGALP00000027418; ENSGALG00000017006.
GeneIDi418866.

Entry informationi

Entry nameiF1NV79_CHICK
AccessioniPrimary (citable) accession number: F1NV79
Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: February 15, 2017
Last modified: November 22, 2017
This is version 54 of the entry and version 4 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported