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F1NI52 (F1NI52_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length389 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSGALP00000026600

Sequences

Sequence LengthMass (Da)Tools
F1NI52 [UniParc].

Last modified June 26, 2013. Version 2.
Checksum: F6BD2BC7D3667AA3

FASTA38943,772
        10         20         30         40         50         60 
MQAVRQDPTL GGSETFNSFL RKAQQETQQI PTEEVVLEVL LSNGQKVKVT ILTSDQTEDV 

        70         80         90        100        110        120 
LEAVASKLDL PDDLVGYFSL FLVRETKDGA FSFVRKLQEF ELPYVSVTSL HNPEFRIILR 

       130        140        150        160        170        180 
KSYWDSSYDD DVMEHHVGLN LLYAQTVSDI EHGWILVNKE QHRQLKSLQE KVSKKEFIRL 

       190        200        210        220        230        240 
AQTLKYYGYL KFDPCVTDFP EKGCHVVVSA GNNELNFQVR LPSEQIKEGS FKVTRMRCWR 

       250        260        270        280        290        300 
VTSSVPMSNG PSGSSPGKSE VKLELAFEYL MSKDRLQWVT ITSPQAIMLS ICLQSMVDEL 

       310        320        330        340        350        360 
MVKKSGGSIR KMFRRRANGA LRRSDSQQAV KSPPLLDSPD ASREPMAKLS SKLTSVSLRG 

       370        380 
ISHSSSANDV GANDFHGNYA FEGIGDEDL 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000026600.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000026600.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AADN03003082 Genomic DNA. No translation available.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000026651; ENSGALP00000026600; ENSGALG00000016517.

Phylogenomic databases

GeneTreeENSGT00530000063147.
OrthoDBEOG70CR71.
TreeFamTF318398.

Family and domain databases

InterProIPR000159. Ras-assoc.
IPR028666. SNX17/SNX31.
[Graphical view]
PANTHERPTHR12431:SF6. PTHR12431:SF6. 1 hit.
PROSITEPS50200. RA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1NI52_CHICK
AccessionPrimary (citable) accession number: F1NI52
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: June 26, 2013
Last modified: February 19, 2014
This is version 20 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)