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F1NI52

- F1NI52_CHICK

UniProt

F1NI52 - F1NI52_CHICK

Protein
Submitted name:

Uncharacterized protein

Gene

SNX17

Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 2 (26 Jun 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phosphatidylinositol binding Source: Ensembl

    GO - Biological processi

    1. receptor-mediated endocytosis Source: Ensembl
    2. signal transduction Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:SNX17Imported
    OrganismiGallus gallus (Chicken)Imported
    Taxonomic identifieri9031 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus
    ProteomesiUP000000539: Chromosome 3

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasmic membrane-bounded vesicle Source: Ensembl
    2. cytosol Source: Ensembl
    3. early endosome Source: Ensembl
    4. Golgi apparatus Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00530000063147.
    OrthoDBiEOG70CR71.
    TreeFamiTF318398.

    Family and domain databases

    InterProiIPR000159. Ras-assoc.
    IPR028666. SNX17.
    [Graphical view]
    PANTHERiPTHR12431:SF16. PTHR12431:SF16. 1 hit.
    PROSITEiPS50200. RA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    F1NI52-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQAVRQDPTL GGSETFNSFL RKAQQETQQI PTEEVVLEVL LSNGQKVKVT    50
    ILTSDQTEDV LEAVASKLDL PDDLVGYFSL FLVRETKDGA FSFVRKLQEF 100
    ELPYVSVTSL HNPEFRIILR KSYWDSSYDD DVMEHHVGLN LLYAQTVSDI 150
    EHGWILVNKE QHRQLKSLQE KVSKKEFIRL AQTLKYYGYL KFDPCVTDFP 200
    EKGCHVVVSA GNNELNFQVR LPSEQIKEGS FKVTRMRCWR VTSSVPMSNG 250
    PSGSSPGKSE VKLELAFEYL MSKDRLQWVT ITSPQAIMLS ICLQSMVDEL 300
    MVKKSGGSIR KMFRRRANGA LRRSDSQQAV KSPPLLDSPD ASREPMAKLS 350
    SKLTSVSLRG ISHSSSANDV GANDFHGNYA FEGIGDEDL 389
    Length:389
    Mass (Da):43,772
    Last modified:June 26, 2013 - v2
    Checksum:iF6BD2BC7D3667AA3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AADN03003082 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSGALT00000026651; ENSGALP00000026600; ENSGALG00000016517.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AADN03003082 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSGALT00000026651 ; ENSGALP00000026600 ; ENSGALG00000016517 .

    Phylogenomic databases

    GeneTreei ENSGT00530000063147.
    OrthoDBi EOG70CR71.
    TreeFami TF318398.

    Family and domain databases

    InterProi IPR000159. Ras-assoc.
    IPR028666. SNX17.
    [Graphical view ]
    PANTHERi PTHR12431:SF16. PTHR12431:SF16. 1 hit.
    PROSITEi PS50200. RA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
      International Chicken Genome Sequencing Consortium
      Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A.
      , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
      Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Red jungle fowlImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Red jungle fowlImported.

    Entry informationi

    Entry nameiF1NI52_CHICK
    AccessioniPrimary (citable) accession number: F1NI52
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 3, 2011
    Last sequence update: June 26, 2013
    Last modified: October 1, 2014
    This is version 23 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3