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F1NI52

- F1NI52_CHICK

UniProt

F1NI52 - F1NI52_CHICK

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Protein
Submitted name:

Uncharacterized protein

Gene

SNX17

Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Biological processi

  1. receptor-mediated endocytosis Source: Ensembl
  2. signal transduction Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:SNX17Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
ProteomesiUP000000539: Chromosome 3

Subcellular locationi

GO - Cellular componenti

  1. cytoplasmic membrane-bounded vesicle Source: Ensembl
  2. cytosol Source: Ensembl
  3. early endosome Source: Ensembl
  4. endosome membrane Source: Ensembl
  5. Golgi apparatus Source: Ensembl
  6. protein complex Source: Ensembl
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063147.
InParanoidiF1NI52.
OrthoDBiEOG70CR71.
TreeFamiTF318398.

Family and domain databases

InterProiIPR000159. Ras-assoc.
IPR028666. SNX17.
[Graphical view]
PANTHERiPTHR12431:SF16. PTHR12431:SF16. 1 hit.
PROSITEiPS50200. RA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

F1NI52-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQAVRQDPTL GGSETFNSFL RKAQQETQQI PTEEVVLEVL LSNGQKVKVT
60 70 80 90 100
ILTSDQTEDV LEAVASKLDL PDDLVGYFSL FLVRETKDGA FSFVRKLQEF
110 120 130 140 150
ELPYVSVTSL HNPEFRIILR KSYWDSSYDD DVMEHHVGLN LLYAQTVSDI
160 170 180 190 200
EHGWILVNKE QHRQLKSLQE KVSKKEFIRL AQTLKYYGYL KFDPCVTDFP
210 220 230 240 250
EKGCHVVVSA GNNELNFQVR LPSEQIKEGS FKVTRMRCWR VTSSVPMSNG
260 270 280 290 300
PSGSSPGKSE VKLELAFEYL MSKDRLQWVT ITSPQAIMLS ICLQSMVDEL
310 320 330 340 350
MVKKSGGSIR KMFRRRANGA LRRSDSQQAV KSPPLLDSPD ASREPMAKLS
360 370 380
SKLTSVSLRG ISHSSSANDV GANDFHGNYA FEGIGDEDL
Length:389
Mass (Da):43,772
Last modified:June 26, 2013 - v2
Checksum:iF6BD2BC7D3667AA3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03003082 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSGALT00000026651; ENSGALP00000026600; ENSGALG00000016517.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03003082 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSGALT00000026651 ; ENSGALP00000026600 ; ENSGALG00000016517 .

Phylogenomic databases

GeneTreei ENSGT00530000063147.
InParanoidi F1NI52.
OrthoDBi EOG70CR71.
TreeFami TF318398.

Family and domain databases

InterProi IPR000159. Ras-assoc.
IPR028666. SNX17.
[Graphical view ]
PANTHERi PTHR12431:SF16. PTHR12431:SF16. 1 hit.
PROSITEi PS50200. RA. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
    International Chicken Genome Sequencing Consortium
    Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A.
    , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
    Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Red jungle fowlImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Red jungle fowlImported.

Entry informationi

Entry nameiF1NI52_CHICK
AccessioniPrimary (citable) accession number: F1NI52
Entry historyi
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: June 26, 2013
Last modified: November 26, 2014
This is version 25 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3