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F1NG48 (F1NG48_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Uncharacterized protein Ensembl ENSGALP00000016225
Gene names
Name:NPAS3 Ensembl ENSGALP00000016225
OrganismGallus gallus (Chicken) [Reference proteome] Ensembl ENSGALP00000016225
Taxonomic identifier9031 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Phasianinae › Gallus

Protein attributes

Sequence length727 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSGALP00000016225

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 Ensembl ENSGALP00000016225

Sequences

Sequence LengthMass (Da)Tools
F1NG48 [UniParc].

Last modified May 3, 2011. Version 1.
Checksum: 18FF492B0B472A1E

FASTA72779,484
        10         20         30         40         50         60 
QVELTGSSVF DYVHPGDHVE MAEQLGMKLP PGRGLLSQGT AEDGASSASS SSQSETPEPV 

        70         80         90        100        110        120 
ESTSPSLLTT DNTLERSFFI RMKSTLTKRG VHIKSSGYKV IHITGRLRLR VSLSHGRTVP 

       130        140        150        160        170        180 
SQIMGLVVVA HALPPPTINE VRIDCHMFVT RVNMDLNIIY CENRISDYMD LTPVDIVGKR 

       190        200        210        220        230        240 
CYHFIHAEDV EGIRHSHLDL LNKGQCVTKY YRWMQKNGGY IWIQSSATIA VNAKNASEKN 

       250        260        270        280        290        300 
IIWVNYLLSN PEYKDTPMDI AQLPHLPEKT SESSETSDSE SDSKDNSGKA HDDNENSKSD 

       310        320        330        340        350        360 
EKGNQSENSE DPESDRKKSG NQSDNEMNCN DDGNSSSNQD SRDSDDSFEN SDFENQKAPE 

       370        380        390        400        410        420 
DSFGTLGSMQ IKVERFVESE SDLRLQNCES LTSDSAKDSD SAGEVNAQSS SKHQKRKKRR 

       430        440        450        460        470        480 
KKQKGGSMTR RRLSSTSSPN GLDSALVDQP QLLSSPNSAS VLKIKTEISE PINFDNDSSI 

       490        500        510        520        530        540 
WNYPPNREIS RNESPYSMTK PPSSEHFPSP QASSSLHVSI PDSVLTPPGT ENTASRKTQF 

       550        560        570        580        590        600 
STSSNSALAP VSSDPLSPPL SASPRDKHPG GPTTSNSLLY TGDLEALQRL QAGNVVLPLV 

       610        620        630        640        650        660 
HRVTGTLATT STAAQRVYTT GTIRYAPAEV TLAMQGNLLP NTHAVNFVDV NSPSFGLDPK 

       670        680        690        700        710        720 
TPMEMLYHHV HRLNMSGPFG SAVSGASLTQ MPAGNVFTTA EGLFSTLPFP VYSNGIHTTQ 


TLERKED

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References

« Hide 'large scale' references
[1]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000016225.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000016225.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AADN02003378 Genomic DNA. No translation available.
AADN02003379 Genomic DNA. No translation available.
AADN02003380 Genomic DNA. No translation available.
IPIIPI00575845.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000016244; ENSGALP00000016225; ENSGALG00000009998.

Phylogenomic databases

GeneTreeENSGT00700000104038.
OMAFENPKAA.

Family and domain databases

InterProIPR001610. PAC.
IPR000014. PAS.
IPR013655. PAS_fold_3.
[Graphical view]
PfamPF08447. PAS_3. 1 hit.
[Graphical view]
SMARTSM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
PROSITEPS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameF1NG48_CHICK
AccessionPrimary (citable) accession number: F1NG48
Entry history
Integrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: May 3, 2011
Last modified: April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info